RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 SRSF2Q01130 221 aaKnown RBP12.61□□□□□ -0.39
ATG4B-223ENST00000493618 GALK2Q01415 458 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 RUNX1T1Q06455 604 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 RPL18Q07020 188 aaKnown RBP12.61□□□□□ -0.39
ATG4B-223ENST00000493618 TRIP10Q15642 601 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 ALKBH6Q3KRA9 238 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 ZNF584Q8IVC4 421 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 SYT14Q8NB59 555 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 UBASH3BQ8TF42 649 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 RASSF5Q8WWW0 418 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 SLC25A44Q96H78 314 aaPredicted RBP12.61□□□□□ -0.39
ATG4B-223ENST00000493618 SNX18Q96RF0 628 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 ZNF347Q96SE7 839 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 ZNF426Q9BUY5 554 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 RNF121Q9H920 327 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 C20orf141Q9NUB4 165 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 TMEM38BQ9NVV0 291 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 LPAR3Q9UBY5 353 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 REV1Q9UBZ9 1251 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 SPEF1Q9Y4P9 236 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 SVEP1Q4LDE5 3571 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 LOC100653049A0A140TA62 436 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 DHHO43323 396 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 PIP5K1CO60331 668 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 KRT34O76011 436 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 OR7A10O76100 309 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 BCL10O95999 233 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 TGFAP01135 160 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 FAM157BP0CG42 384 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 OR8G3PP0DMU2 310 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 TROVE2P10155 538 aaKnown RBP eCLIP12.6□□□□□ -0.394e-6■□□□□ 9.4
ATG4B-223ENST00000493618 FUT1P19526 365 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 GLRXP35754 106 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 AQP2P41181 271 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 PIN1Q13526 163 aaPredicted RBP12.6□□□□□ -0.39
ATG4B-223ENST00000493618 FXNQ16595 210 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 LRRC23Q53EV4 343 aaPredicted RBP12.6□□□□□ -0.39
ATG4B-223ENST00000493618 FAM120AOSQ5T036 256 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 PIWIL3Q7Z3Z3 882 aaKnown RBP12.6□□□□□ -0.39
ATG4B-223ENST00000493618 ZNF786Q8N393 782 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 PAQR4Q8N4S7 273 aaPredicted RBP12.6□□□□□ -0.39
ATG4B-223ENST00000493618 OR4K5Q8NGD3 323 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 OR8J3Q8NGG0 315 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 MOSPD2Q8NHP6 518 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 C10orf82Q8WW14 230 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 ZNF583Q96ND8 569 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 SH3GL1Q99961 368 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 SLC19A3Q9BZV2 496 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 SAR1AQ9NR31 198 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 GMPR2Q9P2T1 348 aaKnown RBP12.6□□□□□ -0.39
ATG4B-223ENST00000493618 DUSP13Q9UII6 198 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 RIMS3Q9UJD0 308 aa12.6□□□□□ -0.39
ATG4B-223ENST00000493618 FBXO9Q9UK97 447 aaPredicted RBP12.6□□□□□ -0.39
ATG4B-223ENST00000493618 A0A1W2PRG6 482 aa12.59□□□□□ -0.39
ATG4B-223ENST00000493618 MCIDASD6RGH6 385 aa12.59□□□□□ -0.39
ATG4B-223ENST00000493618 M0R233 179 aa12.59□□□□□ -0.39
ATG4B-223ENST00000493618 SYNGR3O43761 229 aa12.59□□□□□ -0.39
ATG4B-223ENST00000493618 IGHG1P01857 330 aa12.59□□□□□ -0.39
ATG4B-223ENST00000493618 MT-ND1P03886 318 aa12.59□□□□□ -0.39
ATG4B-223ENST00000493618 VIMP08670 466 aaKnown RBP12.59□□□□□ -0.39
ATG4B-223ENST00000493618 SRD5A1P18405 259 aa12.59□□□□□ -0.39
ATG4B-223ENST00000493618 GIFP27352 417 aa12.59□□□□□ -0.39
ATG4B-223ENST00000493618 APEX1P27695 318 aaKnown RBP12.59□□□□□ -0.39
ATG4B-223ENST00000493618 CHN2P52757 468 aa12.59□□□□□ -0.39
ATG4B-223ENST00000493618 CCNIQ14094 377 aa12.59□□□□□ -0.39
ATG4B-223ENST00000493618 CYBRD1Q53TN4 286 aa12.59□□□□□ -0.39
ATG4B-223ENST00000493618 LRRC18Q8N456 261 aa12.59□□□□□ -0.39
ATG4B-223ENST00000493618 ZNF540Q8NDQ6 660 aa12.59□□□□□ -0.39
ATG4B-223ENST00000493618 NOXO1Q8NFA2 376 aa12.59□□□□□ -0.39
ATG4B-223ENST00000493618 TMEM239Q8WW34 195 aa12.59□□□□□ -0.39
ATG4B-223ENST00000493618 ASB10Q8WXI3 467 aa12.59□□□□□ -0.39
ATG4B-223ENST00000493618 MCHR2Q969V1 340 aa12.59□□□□□ -0.39
ATG4B-223ENST00000493618 SGTBQ96EQ0 304 aa12.59□□□□□ -0.39
ATG4B-223ENST00000493618 TPD52L3Q96J77 140 aa12.59□□□□□ -0.39
ATG4B-223ENST00000493618 BAG5Q9UL15 447 aa12.59□□□□□ -0.39
ATG4B-223ENST00000493618 COL6A5A8TX70 2615 aa12.59□□□□□ -0.39
ATG4B-223ENST00000493618 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.59□□□□□ -0.398e-8■■■■■ 33.7
ATG4B-223ENST00000493618 ATRQ13535 2644 aa12.58□□□□□ -0.39
ATG4B-223ENST00000493618 A0A1W2PPW3 197 aa12.58□□□□□ -0.4
ATG4B-223ENST00000493618 BBIP1A8MTZ0 92 aa12.58□□□□□ -0.4
ATG4B-223ENST00000493618 LILRA1O75019 489 aa12.58□□□□□ -0.4
ATG4B-223ENST00000493618 TRMUO75648 421 aaKnown RBP12.58□□□□□ -0.4
ATG4B-223ENST00000493618 OR5F1O95221 314 aa12.58□□□□□ -0.4
ATG4B-223ENST00000493618 FARS2O95363 451 aaKnown RBP12.58□□□□□ -0.4
ATG4B-223ENST00000493618 SLC2A10O95528 541 aa12.58□□□□□ -0.4
ATG4B-223ENST00000493618 HPXP02790 462 aa12.58□□□□□ -0.4
ATG4B-223ENST00000493618 SERPINA5P05154 406 aa12.58□□□□□ -0.4
ATG4B-223ENST00000493618 NAT2P11245 290 aa12.58□□□□□ -0.4
ATG4B-223ENST00000493618 FUT4P22083 530 aa12.58□□□□□ -0.4
ATG4B-223ENST00000493618 COL8A2P25067 703 aa12.58□□□□□ -0.4
ATG4B-223ENST00000493618 LSP1P33241 339 aa12.58□□□□□ -0.4
ATG4B-223ENST00000493618 MAPRE2Q15555 327 aa12.58□□□□□ -0.4
ATG4B-223ENST00000493618 ELFN2Q5R3F8 820 aa12.58□□□□□ -0.4
ATG4B-223ENST00000493618 TMEM53Q6P2H8 277 aa12.58□□□□□ -0.4
ATG4B-223ENST00000493618 ERICH5Q6P6B1 374 aa12.58□□□□□ -0.4
ATG4B-223ENST00000493618 SLC16A14Q7RTX9 510 aa12.58□□□□□ -0.4
ATG4B-223ENST00000493618 MEX3DQ86XN8 651 aaKnown RBP12.58□□□□□ -0.4
ATG4B-223ENST00000493618 POU5F2Q8N7G0 328 aa12.58□□□□□ -0.4
ATG4B-223ENST00000493618 SLC30A7Q8NEW0 376 aa12.58□□□□□ -0.4
ATG4B-223ENST00000493618 TMEM158Q8WZ71 300 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms