RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 NR4A1P22736 598 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 PPIBP23284 216 aaKnown RBP7.9□□□□□ -1.14
HDAC3-212ENST00000492407 CALCRP30988 508 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 THBS4P35443 961 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 RPS5P46782 204 aaKnown RBP7.9□□□□□ -1.14
HDAC3-212ENST00000492407 CLDN17P56750 224 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 MRPS11P82912 194 aaKnown RBP7.9□□□□□ -1.14
HDAC3-212ENST00000492407 MXRA7P84157 204 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 RIN1Q13671 783 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 RGS21Q2M5E4 152 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 MMEL1Q495T6 779 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 AARDQ4LEZ3 155 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 SLC9B1Q4ZJI4 515 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 ULK3Q6PHR2 472 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 DHRS4L2Q6PKH6 230 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 DEF8Q6ZN54 512 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 KRT73Q86Y46 540 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 CDH26Q8IXH8 852 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 C20orf196Q8IYI0 205 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 TMEM123Q8N131 208 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 MIER2Q8N344 545 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 ANKS4BQ8N8V4 417 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 LINC01356Q8N9X3 169 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 UBASH3BQ8TF42 649 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 GTF2H4Q92759 462 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 SLC25A36Q96CQ1 311 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 KTI12Q96EK9 354 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-212ENST00000492407 OR2M2Q96R28 347 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 EPYCQ99645 322 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 B3GAT2Q9NPZ5 323 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 B3GNT2Q9NY97 397 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 CMAHPQ9Y471 501 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 A0A1B0GVG6 124 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 TMEM129A0AVI4 362 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 CLIC1O00299 241 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 TCF21O43680 179 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 TRAF3IP2O43734 574 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-212ENST00000492407 SYNGR3O43761 229 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 LILRA1O75019 489 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 CRTAPO75718 401 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-212ENST00000492407 C8BP07358 591 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 FUT4P22083 530 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 GLRXP35754 106 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 DVL1P1P54792 670 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-212ENST00000492407 CDH15P55291 814 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 WDR4P57081 412 aaKnown RBP7.89□□□□□ -1.15
HDAC3-212ENST00000492407 RPS23P62266 143 aaKnown RBP7.89□□□□□ -1.15
HDAC3-212ENST00000492407 LGALS3BPQ08380 585 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 SCGB2A2Q13296 93 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 DAG1Q14118 895 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 CARTPTQ16568 116 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 CR1LQ2VPA4 569 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 CEACAM16Q2WEN9 425 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 C6orf10Q5SRN2 563 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 LRIF1Q5T3J3 769 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 REEP3Q6NUK4 255 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 NHLRC1Q6VVB1 395 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 PXKQ7Z7A4 578 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 ADCK1Q86TW2 530 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 UEVLDQ8IX04 471 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 TEX29Q8N6K0 151 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 OR10Z1Q8NGY1 313 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 CKAP2Q8WWK9 683 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 TAAR8Q969N4 342 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 MRPL24Q96A35 216 aaKnown RBP7.89□□□□□ -1.15
HDAC3-212ENST00000492407 C7orf34Q96L11 122 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 ELAC2Q9BQ52 826 aaKnown RBP7.89□□□□□ -1.15
HDAC3-212ENST00000492407 PAIP1Q9H074 479 aaKnown RBP7.89□□□□□ -1.15
HDAC3-212ENST00000492407 VCXQ9H320 206 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 CHODLQ9H9P2 273 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 NOX3Q9HBY0 568 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 DYNLRB1Q9NP97 96 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 SELENONQ9NZV5 590 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 KLHL14Q9P2G3 628 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 TESQ9UGI8 421 aaKnown RBP7.89□□□□□ -1.15
HDAC3-212ENST00000492407 TMEFF2Q9UIK5 374 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-212ENST00000492407 BAG5Q9UL15 447 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 CORO2BQ9UQ03 480 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 NOX1Q9Y5S8 564 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 COMMD3-BMI1R4GMX3 469 aa7.89□□□□□ -1.15
HDAC3-212ENST00000492407 A0A087WUJ7 227 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 A0A1B0GWA3 101 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 TMEM120BA0PK00 339 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 SLC22A23A1A5C7 686 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 B4DSR2 109 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 MS4A18H0YCH9 400 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 M0R082 166 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 FMO6PO60774 539 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 SERPINB7O75635 380 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 TIPRLO75663 272 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 MT-ATP6P00846 226 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 ZNF35P13682 527 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 IFNGR1P15260 489 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 HOXB9P17482 250 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-212ENST00000492407 APEX1P27695 318 aaKnown RBP7.88□□□□□ -1.15
HDAC3-212ENST00000492407 GRPRP30550 384 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 TMEM33P57088 247 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 IL1RL1Q01638 556 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 GSG1Q2KHT4 349 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 MS4A18Q3C1V0 323 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms