RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 HDAC3O15379 428 aa11.69□□□□□ -0.54
ATG4B-222ENST00000491867 AHSA1O95433 338 aa11.69□□□□□ -0.54
ATG4B-222ENST00000491867 ZCCHC18P0CG32 403 aa11.69□□□□□ -0.54
ATG4B-222ENST00000491867 IDO1P14902 403 aa11.69□□□□□ -0.54
ATG4B-222ENST00000491867 B4GALT1P15291 398 aa11.69□□□□□ -0.54
ATG4B-222ENST00000491867 ZNF250P15622 560 aa11.69□□□□□ -0.54
ATG4B-222ENST00000491867 RBMXP38159 391 aaKnown RBP11.69□□□□□ -0.54
ATG4B-222ENST00000491867 TNFAIP8L3Q5GJ75 292 aa11.69□□□□□ -0.54
ATG4B-222ENST00000491867 CARD17Q5XLA6 110 aa11.69□□□□□ -0.54
ATG4B-222ENST00000491867 FIP1L1Q6UN15 594 aaKnown RBP11.69□□□□□ -0.54
ATG4B-222ENST00000491867 C9orf139Q6ZV77 190 aa11.69□□□□□ -0.54
ATG4B-222ENST00000491867 TMEM123Q8N131 208 aa11.69□□□□□ -0.54
ATG4B-222ENST00000491867 PARP8Q8N3A8 854 aa11.69□□□□□ -0.54
ATG4B-222ENST00000491867 OR52E2Q8NGJ4 325 aa11.69□□□□□ -0.54
ATG4B-222ENST00000491867 MFSD8Q8NHS3 518 aa11.69□□□□□ -0.54
ATG4B-222ENST00000491867 ELMOD3Q96FG2 381 aa11.69□□□□□ -0.54
ATG4B-222ENST00000491867 TMEM19Q96HH6 336 aa11.69□□□□□ -0.54
ATG4B-222ENST00000491867 OXGR1Q96P68 337 aa11.69□□□□□ -0.54
ATG4B-222ENST00000491867 PTDSS2Q9BVG9 487 aa11.69□□□□□ -0.54
ATG4B-222ENST00000491867 SPATA9Q9BWV2 254 aa11.69□□□□□ -0.54
ATG4B-222ENST00000491867 DENND2DQ9H6A0 471 aaPredicted RBP11.69□□□□□ -0.54
ATG4B-222ENST00000491867 ARMC7Q9H6L4 198 aa11.69□□□□□ -0.54
ATG4B-222ENST00000491867 TPT1P8Q9HAU6 139 aa11.69□□□□□ -0.54
ATG4B-222ENST00000491867 KCNK9Q9NPC2 374 aa11.69□□□□□ -0.54
ATG4B-222ENST00000491867 ZNF224Q9NZL3 707 aa11.69□□□□□ -0.54
ATG4B-222ENST00000491867 B3GAT1Q9P2W7 334 aa11.69□□□□□ -0.54
ATG4B-222ENST00000491867 A0A0G2JPF8 293 aa11.68□□□□□ -0.54
ATG4B-222ENST00000491867 TRPC5OSA6NMA1 111 aa11.68□□□□□ -0.54
ATG4B-222ENST00000491867 HNRNPCL2B2RXH8 293 aa11.68□□□□□ -0.54
ATG4B-222ENST00000491867 HNRNPCL3B7ZW38 293 aa11.68□□□□□ -0.54
ATG4B-222ENST00000491867 HNRNPCL1O60812 293 aaKnown RBP11.68□□□□□ -0.54
ATG4B-222ENST00000491867 FZD7O75084 574 aa11.68□□□□□ -0.54
ATG4B-222ENST00000491867 SLC22A3O75751 556 aa11.68□□□□□ -0.54
ATG4B-222ENST00000491867 ANP32DO95626 131 aa11.68□□□□□ -0.54
ATG4B-222ENST00000491867 PATE4P0C8F1 98 aa11.68□□□□□ -0.54
ATG4B-222ENST00000491867 HNRNPCL4P0DMR1 293 aa11.68□□□□□ -0.54
ATG4B-222ENST00000491867 GTF2E2P29084 291 aaKnown RBP11.68□□□□□ -0.54
ATG4B-222ENST00000491867 RPS5P46782 204 aaKnown RBP11.68□□□□□ -0.54
ATG4B-222ENST00000491867 ERVS71-1P61550 626 aa11.68□□□□□ -0.54
ATG4B-222ENST00000491867 GLO1Q04760 184 aa11.68□□□□□ -0.54
ATG4B-222ENST00000491867 EGR4Q05215 589 aa11.68□□□□□ -0.54
ATG4B-222ENST00000491867 PDCD4Q53EL6 469 aaKnown RBP11.68□□□□□ -0.54
ATG4B-222ENST00000491867 ATG16L1Q676U5 607 aa11.68□□□□□ -0.54
ATG4B-222ENST00000491867 ZNF584Q8IVC4 421 aa11.68□□□□□ -0.54
ATG4B-222ENST00000491867 PAQR4Q8N4S7 273 aaPredicted RBP11.68□□□□□ -0.54
ATG4B-222ENST00000491867 BHLHE22Q8NFJ8 381 aaPredicted RBP11.68□□□□□ -0.54
ATG4B-222ENST00000491867 ZDHHC16Q969W1 377 aa11.68□□□□□ -0.54
ATG4B-222ENST00000491867 VPS33AQ96AX1 596 aa11.68□□□□□ -0.54
ATG4B-222ENST00000491867 PAIP2Q9BPZ3 127 aaKnown RBP11.68□□□□□ -0.54
ATG4B-222ENST00000491867 CENPHQ9H3R5 247 aa11.68□□□□□ -0.54
ATG4B-222ENST00000491867 CACYBPQ9HB71 228 aaKnown RBP11.68□□□□□ -0.54
ATG4B-222ENST00000491867 TCF7L1Q9HCS4 588 aa11.68□□□□□ -0.54
ATG4B-222ENST00000491867 THUMPD1Q9NXG2 353 aaKnown RBP11.68□□□□□ -0.54
ATG4B-222ENST00000491867 ZNF232Q9UNY5 417 aa11.68□□□□□ -0.54
ATG4B-222ENST00000491867 POFUT2Q9Y2G5 429 aa11.68□□□□□ -0.54
ATG4B-222ENST00000491867 POLR3KQ9Y2Y1 108 aaPredicted RBP11.68□□□□□ -0.54
ATG4B-222ENST00000491867 IFT52Q9Y366 437 aa11.68□□□□□ -0.54
ATG4B-222ENST00000491867 RNF114Q9Y508 228 aa11.68□□□□□ -0.54
ATG4B-222ENST00000491867 DNAH3Q8TD57 4116 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 TMEM247A6NEH6 219 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 PLXNB1O43157 2135 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 ZNF500O60304 480 aaPredicted RBP11.67□□□□□ -0.54
ATG4B-222ENST00000491867 SNNO75324 88 aaPredicted RBP11.67□□□□□ -0.54
ATG4B-222ENST00000491867 UBOX5O94941 541 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 MT-ND5P03915 603 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 SERPINA5P05154 406 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 LCKP06239 509 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 SBK2P0C263 348 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 OR8G3PP0DMU2 310 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 SEC61A1P61619 476 aaKnown RBP11.67□□□□□ -0.54
ATG4B-222ENST00000491867 HOXC5Q00444 222 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 HNRNPA0Q13151 305 aaKnown RBP11.67□□□□□ -0.54
ATG4B-222ENST00000491867 MFSD13AQ14CX5 517 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 FAM189A2Q15884 450 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 GTDC1Q4AE62 458 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 HHATQ5VTY9 493 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 NXNQ6DKJ4 435 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 MSANTD1Q6ZTZ1 278 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 ZNF627Q7L945 461 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 C20orf196Q8IYI0 205 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 ZNF519Q8TB69 540 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 C11orf40Q8WZ69 217 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 SLC35B4Q969S0 331 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 ITCHQ96J02 903 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 MAELQ96JY0 434 aaKnown RBP11.67□□□□□ -0.54
ATG4B-222ENST00000491867 RMND5AQ9H871 391 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 MARCH7Q9H992 704 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 NPHS2Q9NP85 383 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 THAP1Q9NVV9 213 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 ZIM2Q9NZV7 527 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.67□□□□□ -0.54
ATG4B-222ENST00000491867 FBXL3Q9UKT7 428 aa11.67□□□□□ -0.54
ATG4B-222ENST00000491867 V9GYY5 206 aaPredicted RBP11.67□□□□□ -0.54
ATG4B-222ENST00000491867 DOCK11Q5JSL3 2073 aa11.66□□□□□ -0.54
ATG4B-222ENST00000491867 SRRM5B3KS81 715 aa11.66□□□□□ -0.54
ATG4B-222ENST00000491867 AKAP8O43823 692 aaKnown RBP11.66□□□□□ -0.54
ATG4B-222ENST00000491867 PLATP00750 562 aa11.66□□□□□ -0.54
ATG4B-222ENST00000491867 KITP10721 976 aa11.66□□□□□ -0.54
ATG4B-222ENST00000491867 CCL2P13500 99 aa11.66□□□□□ -0.54
ATG4B-222ENST00000491867 CD80P33681 288 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms