RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 P2RY1P47900 373 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 ARRB1P49407 418 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 PSMC5P62195 406 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 RAD51Q06609 339 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 EGFEM1PQ0D2K5 195 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 RAB40BQ12829 278 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 MAPRE2Q15555 327 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 VAMP3Q15836 100 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 VPS26BQ4G0F5 336 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 BEND3Q5T5X7 828 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 OR52W1Q6IF63 320 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 H3F3CQ6NXT2 135 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 TPGS1Q6ZTW0 290 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 Q6ZVH6 145 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 C17orf82Q86X59 251 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 MFSD6LQ8IWD5 586 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 NELFCDQ8IXH7 590 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 LINC01561Q8N1V8 128 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 TNFRSF14Q92956 283 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 ZNF799Q96GE5 643 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 C12orf42Q96LP6 360 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 FMO2Q99518 471 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 MCHR1Q99705 422 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 TMEM246Q9BRR3 403 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 ZNF302Q9NR11 478 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 UXTQ9UBK9 157 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 PHF11Q9UIL8 331 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 BTNL2Q9UIR0 455 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 ENPP5Q9UJA9 477 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 PEX16Q9Y5Y5 336 aa3.31□□□□□ -1.88
HMGB1P38-201ENST00000490557 UNC13AQ9UPW8 1703 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 A0A0J9YXY3 114 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 PINLYPA6NC86 204 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 CCDC182A6NF36 153 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 PP2D1A8MPX8 630 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 SCAMP2O15127 329 aaKnown RBP3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 LCA5LO95447 670 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 LALBAP00709 142 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 TIMP1P01033 207 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 MYL2P10916 166 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 NQO2P16083 231 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 CD40LGP29965 261 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 DUSP3P51452 185 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 CKAP4Q07065 602 aaKnown RBP3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 ITGB3BPQ13352 177 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 C1orf61Q13536 156 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 ARFRP1Q13795 201 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 GNA13Q14344 377 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 CYTH1Q15438 398 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 KLHL38Q2WGJ6 581 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 ULK3Q6PHR2 472 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 TRIM69Q86WT6 500 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 PLCZ1Q86YW0 608 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 SLC35F2Q8IXU6 374 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 FBXO36Q8NEA4 188 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 OR10A7Q8NGE5 316 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 OR4D6Q8NGJ1 314 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 OR4A4PQ8NGN8 299 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 RNF138Q8WVD3 245 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 PIH1D2Q8WWB5 315 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 CACNG8Q8WXS5 425 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 MRGPRFQ96AM1 343 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 C8orf44Q96CB5 159 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 CELF6Q96J87 481 aaKnown RBP3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 PLEKHF1Q96S99 279 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 NAPGQ99747 312 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 P2RY13Q9BPV8 354 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 SPZ1Q9BXG8 430 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 SRXN1Q9BYN0 137 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 POLR2J2Q9GZM3 115 aaKnown RBP3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 POLR2J3Q9H1A7 115 aaKnown RBP3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 ANKRD19PQ9H560 264 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 ZDHHC11Q9H8X9 412 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 SH2D2AQ9NP31 389 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 IL36GQ9NZH8 169 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 WRAP73Q9P2S5 460 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 NUP50Q9UKX7 468 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 KPTNQ9Y664 436 aa3.3□□□□□ -1.88
HMGB1P38-201ENST00000490557 C1orf232A0A0U1RR37 186 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 KBTBD11-OT1A0A1B0GTJ5 212 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 ZNF705EA8MWA4 302 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 E7ESA3 106 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 G3V4G9 280 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 K7N7A8 449 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 ZNF861PO60384 105 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 NDUFS6O75380 124 aaKnown RBP3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 MYO1DO94832 1006 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 SUPT7LO94864 414 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 IGHV3-48P01763 117 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 GAPDHP04406 335 aaKnown RBP3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 P04436 131 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 SERPINE2P07093 398 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 CD82P27701 267 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 IL12BP29460 328 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 AQP1P29972 269 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 GNA11P29992 359 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 SLC1A2P43004 574 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 KCNJ3P48549 501 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 CLDN18P56856 261 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 RAB10P61026 200 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms