RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 DCKP27707 260 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 IL12AP29459 219 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 RPA3P35244 121 aaPredicted RBP2.44□□□□□ -2.02
UBXN4-208ENST00000490163 FEN1P39748 380 aaKnown RBP2.44□□□□□ -2.02
UBXN4-208ENST00000490163 NOVP48745 357 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 HCAR3P49019 387 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 ILKQ13418 452 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 FLOT2Q14254 428 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 IHHQ14623 411 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 KCTD19Q17RG1 926 aaPredicted RBP2.44□□□□□ -2.02
UBXN4-208ENST00000490163 KLHL22Q53GT1 634 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 ZNF542PQ5EBM4 170 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 FNBP1LQ5T0N5 605 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 MLIPQ5VWP3 458 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 HPS6Q86YV9 775 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 C12orf56Q8IXR9 622 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 PIANPQ8IYJ0 282 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 CPNE9Q8IYJ1 553 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 MDS2Q8NDY4 140 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 OR6S1Q8NH40 331 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 GPR148Q8TDV2 347 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 PDCD6IPQ8WUM4 868 aaKnown RBP2.44□□□□□ -2.02
UBXN4-208ENST00000490163 ART4Q93070 314 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 TESCQ96BS2 214 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 SMARCD1Q96GM5 515 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 TMEM121Q9BTD3 319 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 ZNF747Q9BV97 191 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 POTEKPQ9BYX7 375 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 ZNF665Q9H7R5 613 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 ABCB10Q9NRK6 738 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 HIF1ANQ9NWT6 349 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 ENPP5Q9UJA9 477 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 POMPQ9Y244 141 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 CACNG2Q9Y698 323 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 POLR2AP24928 1970 aaKnown RBP2.44□□□□□ -2.02
UBXN4-208ENST00000490163 A0A087X1B8 175 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 SAGE2PA6NJ88 616 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 MPTX1A8MV57 137 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 M0R3G1 203 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 DLGAP1O14490 977 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 ITGB1BP1O14713 200 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 SCO1O75880 301 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 FTH1P02794 183 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 TRIM49P0CI25 452 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 TRIM49CP0CI26 452 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 RPL35P42766 123 aaKnown RBP2.44□□□□□ -2.02
UBXN4-208ENST00000490163 RGRP47804 291 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 TMBIM6P55061 237 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 MRPS22P82650 360 aaKnown RBP2.44□□□□□ -2.02
UBXN4-208ENST00000490163 CDC20Q12834 499 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 SLC1A5Q15758 541 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 ZNF124Q15973 351 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 ALKBH6Q3KRA9 238 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 IGFL4Q6B9Z1 124 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 OR2A2Q6IF42 318 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 ZNF425Q6IV72 752 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 XKRXQ6PP77 449 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 NT5DC3Q86UY8 548 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 CRLF3Q8IUI8 442 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 DEFB107AQ8IZN7 70 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 CCDC185Q8N715 623 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 MARC2Q969Z3 335 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 TMEM80Q96HE8 168 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 PPP1R2P1Q96PQ5 205 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 QKIQ96PU8 341 aaKnown RBP eCLIP2.44□□□□□ -2.02
UBXN4-208ENST00000490163 ALKBH3Q96Q83 286 aaPredicted RBP2.44□□□□□ -2.02
UBXN4-208ENST00000490163 RPP25Q9BUL9 199 aaKnown RBP2.44□□□□□ -2.02
UBXN4-208ENST00000490163 MRIQ9BWK5 157 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 PPA2Q9H2U2 334 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 SAV1Q9H4B6 383 aaPredicted RBP2.44□□□□□ -2.02
UBXN4-208ENST00000490163 IKZF5Q9H5V7 419 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 GLTPQ9NZD2 209 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 IL37Q9NZH6 218 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 COPS7AQ9UBW8 275 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 PCYOX1Q9UHG3 505 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 ENOPH1Q9UHY7 261 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 ST6GALNAC2Q9UJ37 374 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 A0A1B0GUS0 222 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 A0A1W2PRD5 423 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 H0YJX3 145 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 TMX2-CTNND1H3BSU7 103 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 GATCO43716 136 aaKnown RBP2.44□□□□□ -2.02
UBXN4-208ENST00000490163 DEXIO95424 95 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 RPS17P08708 135 aaKnown RBP2.44□□□□□ -2.02
UBXN4-208ENST00000490163 HSPD1P10809 573 aaKnown RBP2.44□□□□□ -2.02
UBXN4-208ENST00000490163 C4BPBP20851 252 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 SAA4P35542 130 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 COILP38432 576 aaPredicted RBP2.44□□□□□ -2.02
UBXN4-208ENST00000490163 RPL3P39023 403 aaKnown RBP2.44□□□□□ -2.02
UBXN4-208ENST00000490163 CSKP41240 450 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 CRATP43155 626 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 ARPP19P56211 112 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 AP1S2P56377 157 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 RGS8P57771 180 aaPredicted RBP2.44□□□□□ -2.02
UBXN4-208ENST00000490163 DCDC1P59894 354 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 SLC17A1Q14916 467 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 NCF4Q15080 339 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 NRF1Q16656 503 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 DCAF10Q5QP82 559 aa2.44□□□□□ -2.02
UBXN4-208ENST00000490163 UTF1Q5T230 341 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms