RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 NPIPA1Q9UND3 350 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 ATP6V1DQ9Y5K8 247 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 KIF21BO75037 1637 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 MSH6P52701 1360 aa2.59□□□□□ -2
SSR1-209ENST00000488834 CPSF1Q10570 1443 aaKnown RBP2.59□□□□□ -2
SSR1-209ENST00000488834 SPATA31E1Q6ZUB1 1445 aa2.59□□□□□ -2
SSR1-209ENST00000488834 ANKRD50Q9ULJ7 1429 aa2.59□□□□□ -2
SSR1-209ENST00000488834 REREQ9P2R6 1566 aa2.58□□□□□ -2
SSR1-209ENST00000488834 LRRK1Q38SD2 2015 aa2.58□□□□□ -2
SSR1-209ENST00000488834 E9PCH4 1651 aa2.58□□□□□ -2
SSR1-209ENST00000488834 IGLV3-16A0A075B6K0 115 aa2.58□□□□□ -2
SSR1-209ENST00000488834 PP2D1A8MPX8 630 aa2.58□□□□□ -2
SSR1-209ENST00000488834 C12orf71A8MTZ7 269 aa2.58□□□□□ -2
SSR1-209ENST00000488834 CENPBD1B2RD01 187 aa2.58□□□□□ -2
SSR1-209ENST00000488834 C9JVG2 144 aa2.58□□□□□ -2
SSR1-209ENST00000488834 GOLGA8KD6RF30 607 aa2.58□□□□□ -2
SSR1-209ENST00000488834 G3V4G9 280 aa2.58□□□□□ -2
SSR1-209ENST00000488834 PSMD11O00231 422 aa2.58□□□□□ -2
SSR1-209ENST00000488834 SNAPINO95295 136 aa2.58□□□□□ -2
SSR1-209ENST00000488834 OXSR1O95747 527 aaPredicted RBP2.58□□□□□ -2
SSR1-209ENST00000488834 TSPAN12O95859 305 aa2.58□□□□□ -2
SSR1-209ENST00000488834 CA1P00915 261 aaPredicted RBP2.58□□□□□ -2
SSR1-209ENST00000488834 MBP02144 154 aa2.58□□□□□ -2
SSR1-209ENST00000488834 ALOX5P09917 674 aa2.58□□□□□ -2
SSR1-209ENST00000488834 GOLGA8HP0CJ92 632 aa2.58□□□□□ -2
SSR1-209ENST00000488834 CYP2B6P20813 491 aa2.58□□□□□ -2
SSR1-209ENST00000488834 NT5EP21589 574 aa2.58□□□□□ -2
SSR1-209ENST00000488834 MSR1P21757 451 aa2.58□□□□□ -2
SSR1-209ENST00000488834 CFL1P23528 166 aaKnown RBP2.58□□□□□ -2
SSR1-209ENST00000488834 LAP3P28838 519 aa2.58□□□□□ -2
SSR1-209ENST00000488834 HMOX2P30519 316 aa2.58□□□□□ -2
SSR1-209ENST00000488834 HTR2BP41595 481 aa2.58□□□□□ -2
SSR1-209ENST00000488834 NAMPTP43490 491 aa2.58□□□□□ -2
SSR1-209ENST00000488834 CCT3P49368 545 aaKnown RBP2.58□□□□□ -2
SSR1-209ENST00000488834 APOC4P55056 127 aa2.58□□□□□ -2
SSR1-209ENST00000488834 PLTPP55058 493 aa2.58□□□□□ -2
SSR1-209ENST00000488834 C21orf59P57076 290 aa2.58□□□□□ -2
SSR1-209ENST00000488834 RGS8P57771 180 aaPredicted RBP2.58□□□□□ -2
SSR1-209ENST00000488834 POLR2GP62487 172 aaKnown RBP eCLIP2.58□□□□□ -2
SSR1-209ENST00000488834 CSNK1G2P78368 415 aa2.58□□□□□ -2
SSR1-209ENST00000488834 HPCAP84074 193 aa2.58□□□□□ -2
SSR1-209ENST00000488834 ASPHQ12797 758 aa2.58□□□□□ -2
SSR1-209ENST00000488834 ITGB3BPQ13352 177 aaPredicted RBP2.58□□□□□ -2
SSR1-209ENST00000488834 COTL1Q14019 142 aa2.58□□□□□ -2
SSR1-209ENST00000488834 TGFBIQ15582 683 aa2.58□□□□□ -2
SSR1-209ENST00000488834 KLHL38Q2WGJ6 581 aa2.58□□□□□ -2
SSR1-209ENST00000488834 ZNF829Q3KNS6 432 aaPredicted RBP2.58□□□□□ -2
SSR1-209ENST00000488834 ZCWPW2Q504Y3 356 aa2.58□□□□□ -2
SSR1-209ENST00000488834 CYB5R2Q6BCY4 276 aa2.58□□□□□ -2
SSR1-209ENST00000488834 FAM199XQ6PEV8 388 aaPredicted RBP2.58□□□□□ -2
SSR1-209ENST00000488834 IGFL3Q6UXB1 125 aa2.58□□□□□ -2
SSR1-209ENST00000488834 RNF165Q6ZSG1 346 aa2.58□□□□□ -2
SSR1-209ENST00000488834 MOB3BQ86TA1 216 aa2.58□□□□□ -2
SSR1-209ENST00000488834 LINC00523Q86TU6 105 aa2.58□□□□□ -2
SSR1-209ENST00000488834 ERO1BQ86YB8 467 aa2.58□□□□□ -2
SSR1-209ENST00000488834 NKAIN4Q8IVV8 208 aa2.58□□□□□ -2
SSR1-209ENST00000488834 KIR3DL3Q8N743 410 aa2.58□□□□□ -2
SSR1-209ENST00000488834 ASCC1Q8N9N2 400 aaKnown RBP2.58□□□□□ -2
SSR1-209ENST00000488834 SYT14Q8NB59 555 aa2.58□□□□□ -2
SSR1-209ENST00000488834 FAM83FQ8NEG4 500 aaPredicted RBP2.58□□□□□ -2
SSR1-209ENST00000488834 OR4K14Q8NGD5 310 aa2.58□□□□□ -2
SSR1-209ENST00000488834 OR1L4Q8NGR5 311 aa2.58□□□□□ -2
SSR1-209ENST00000488834 CLHC1Q8NHS4 586 aa2.58□□□□□ -2
SSR1-209ENST00000488834 GPX8Q8TED1 209 aa2.58□□□□□ -2
SSR1-209ENST00000488834 DDI1Q8WTU0 396 aa2.58□□□□□ -2
SSR1-209ENST00000488834 GLYATL2Q8WU03 294 aa2.58□□□□□ -2
SSR1-209ENST00000488834 ST8SIA1Q92185 356 aa2.58□□□□□ -2
SSR1-209ENST00000488834 MRPS31Q92665 395 aaKnown RBP2.58□□□□□ -2
SSR1-209ENST00000488834 RDH5Q92781 318 aa2.58□□□□□ -2
SSR1-209ENST00000488834 SGK3Q96BR1 496 aa2.58□□□□□ -2
SSR1-209ENST00000488834 HAUS1Q96CS2 278 aa2.58□□□□□ -2
SSR1-209ENST00000488834 TMA16Q96EY4 203 aaKnown RBP2.58□□□□□ -2
SSR1-209ENST00000488834 SLC35E1Q96K37 410 aa2.58□□□□□ -2
SSR1-209ENST00000488834 CEP19Q96LK0 163 aa2.58□□□□□ -2
SSR1-209ENST00000488834 TSNARE1Q96NA8 513 aa2.58□□□□□ -2
SSR1-209ENST00000488834 ARHGDIGQ99819 225 aa2.58□□□□□ -2
SSR1-209ENST00000488834 CENPKQ9BS16 269 aa2.58□□□□□ -2
SSR1-209ENST00000488834 TUBGCP2Q9BSJ2 902 aa2.58□□□□□ -2
SSR1-209ENST00000488834 TRIM62Q9BVG3 475 aa2.58□□□□□ -2
SSR1-209ENST00000488834 TIPINQ9BVW5 301 aa2.58□□□□□ -2
SSR1-209ENST00000488834 ROGDIQ9GZN7 287 aa2.58□□□□□ -2
SSR1-209ENST00000488834 FBXO44Q9H4M3 255 aa2.58□□□□□ -2
SSR1-209ENST00000488834 SMYD3Q9H7B4 428 aa2.58□□□□□ -2
SSR1-209ENST00000488834 PSTPIP2Q9H939 334 aa2.58□□□□□ -2
SSR1-209ENST00000488834 PLGRKTQ9HBL7 147 aa2.58□□□□□ -2
SSR1-209ENST00000488834 MCCC2Q9HCC0 563 aa2.58□□□□□ -2
SSR1-209ENST00000488834 ARMC1Q9NVT9 282 aa2.58□□□□□ -2
SSR1-209ENST00000488834 RHBDL2Q9NX52 303 aa2.58□□□□□ -2
SSR1-209ENST00000488834 EURLQ9NYK6 297 aa2.58□□□□□ -2
SSR1-209ENST00000488834 WARS2Q9UGM6 360 aaKnown RBP2.58□□□□□ -2
SSR1-209ENST00000488834 ADAM28Q9UKQ2 775 aa2.58□□□□□ -2
SSR1-209ENST00000488834 PRPF19Q9UMS4 504 aaKnown RBP2.58□□□□□ -2
SSR1-209ENST00000488834 RPH3ALQ9UNE2 315 aa2.58□□□□□ -2
SSR1-209ENST00000488834 RHBDD3Q9Y3P4 386 aa2.58□□□□□ -2
SSR1-209ENST00000488834 HEY1Q9Y5J3 304 aa2.58□□□□□ -2
SSR1-209ENST00000488834 CACNG2Q9Y698 323 aa2.58□□□□□ -2
SSR1-209ENST00000488834 MYO3BQ8WXR4 1341 aa2.58□□□□□ -2
SSR1-209ENST00000488834 ATP10DQ9P241 1426 aa2.58□□□□□ -2
SSR1-209ENST00000488834 MYH1P12882 1939 aa2.58□□□□□ -2
SSR1-209ENST00000488834 MYH2Q9UKX2 1941 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms