RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 OR6C68A6NDL8 312 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 C12orf71A8MTZ7 269 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 A8MVM7 634 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 NKX2-8O15522 239 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 PAHP00439 452 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 SBK2P0C263 348 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 TFPIP10646 304 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 APEHP13798 732 aaKnown RBP10.95□□□□□ -0.66
HDAC6-230ENST00000488543 PAICSP22234 425 aaKnown RBP10.95□□□□□ -0.66
HDAC6-230ENST00000488543 CTXN1P60606 82 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 RPS7P62081 194 aaKnown RBP10.95□□□□□ -0.66
HDAC6-230ENST00000488543 FOXC1Q12948 553 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 CHAF1BQ13112 559 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 PRAMEF20Q5VT98 475 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 C1orf140Q5VVS0 124 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 PLET1Q6UQ28 207 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 SYT9Q86SS6 491 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 ARMC10Q8N2F6 343 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 EXD3Q8N9H8 876 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 OR13C5Q8NGS8 318 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 OR52N1Q8NH53 320 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 TMEM234Q8WY98 164 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 NTNG2Q96CW9 530 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 THOC3Q96J01 351 aaKnown RBP10.95□□□□□ -0.66
HDAC6-230ENST00000488543 NMNAT3Q96T66 252 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 METTL7AQ9H8H3 244 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 TAS2R5Q9NYW4 299 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 PPP4R1LQ9P1A2 415 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 A0A0B4J203 849 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 LYRM1O43325 122 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 SLC25A12O75746 678 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 F13BP05160 661 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 SHC1P29353 583 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 CDKN2AP42771 156 aaKnown RBP10.94□□□□□ -0.66
HDAC6-230ENST00000488543 HCCSP53701 268 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 GALK2Q01415 458 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 FOXF1Q12946 379 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 DCAF10Q5QP82 559 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 THOC7Q6I9Y2 204 aaKnown RBP10.94□□□□□ -0.66
HDAC6-230ENST00000488543 ZNF322Q6U7Q0 402 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-230ENST00000488543 KLHL36Q8N4N3 616 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 RFLNBQ8N5W9 214 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 ACBD7Q8N6N7 88 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 LSM14AQ8ND56 463 aaKnown RBP10.94□□□□□ -0.66
HDAC6-230ENST00000488543 OR2M3Q8NG83 312 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 TSPAN32Q96QS1 320 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 MCUBQ9NWR8 336 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 FAM240BA0A1B0GVZ2 78 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 TRDV1A0A1B0GX56 115 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 G3V3Y1 287 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 MT-ATP6P00846 226 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 PRKAR1AP10644 381 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 ICAM2P13598 275 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 MSX1P28360 303 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 EVX1P49640 407 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 MLF1P58340 268 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 PPP3R1P63098 170 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 ACSM1Q08AH1 577 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 GGTLC2Q14390 218 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 NDUFA5Q16718 116 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 SLC25A53Q5H9E4 307 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 MTFR2Q6P444 385 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 CD200R1LQ6Q8B3 271 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 ARL9Q6T311 187 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 MDGA2Q7Z553 956 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 TMEM156Q8N614 296 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 OR10H4Q8NGA5 316 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 POC1BQ8TC44 478 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 MED18Q9BUE0 208 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 ASB6Q9NWX5 421 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 EXTL2Q9UBQ6 330 aa10.94□□□□□ -0.66
HDAC6-230ENST00000488543 MED12Q93074 2177 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 SHISA8B8ZZ34 492 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 FTCDNL1E5RQL4 147 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 ERVH48-1M5A8F1 160 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 EFNA2O43921 213 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 DXOO77932 396 aaKnown RBP10.93□□□□□ -0.66
HDAC6-230ENST00000488543 TFP02787 698 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 HIST1H2ABP04908 130 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 SERPINA7P05543 415 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 EIF4EP06730 217 aaKnown RBP10.93□□□□□ -0.66
HDAC6-230ENST00000488543 LIPCP11150 499 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 SPI1P17947 270 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 CD82P27701 267 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 SDHAP31040 664 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 FGF9P31371 208 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-230ENST00000488543 SRP9P49458 86 aaKnown RBP10.93□□□□□ -0.66
HDAC6-230ENST00000488543 ZNF85Q03923 595 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 SLC3A1Q07837 685 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 PLPPR5Q32ZL2 321 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 FAM69AQ5T7M9 428 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 HIST3H2AQ7L7L0 130 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 MAMDC2Q7Z304 686 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-230ENST00000488543 FADS6Q8N9I5 356 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 OR51L1Q8NGJ5 315 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 AP3S1Q92572 193 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 HIST1H2ACQ93077 130 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 KIAA1143Q96AT1 154 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-230ENST00000488543 ZMYND19Q96E35 227 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-230ENST00000488543 HDHD2Q9H0R4 259 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms