RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 SPATA3Q8NHX4 192 aa16.64■□□□□ 0.26
CD55-209ENST00000488171 MSI2Q96DH6 328 aaKnown RBP16.64■□□□□ 0.26
CD55-209ENST00000488171 POLR2J2Q9GZM3 115 aaKnown RBP16.64■□□□□ 0.26
CD55-209ENST00000488171 POLR2J3Q9H1A7 115 aaKnown RBP16.64■□□□□ 0.26
CD55-209ENST00000488171 ZNF446Q9NWS9 450 aa16.64■□□□□ 0.26
CD55-209ENST00000488171 FBXL3Q9UKT7 428 aa16.64■□□□□ 0.26
CD55-209ENST00000488171 SPEF1Q9Y4P9 236 aa16.64■□□□□ 0.26
CD55-209ENST00000488171 FAM220BPB1ANY3 271 aa16.64■□□□□ 0.25
CD55-209ENST00000488171 OR7A10O76100 309 aa16.64■□□□□ 0.25
CD55-209ENST00000488171 IGF2P01344 180 aa16.64■□□□□ 0.25
CD55-209ENST00000488171 SERPINA5P05154 406 aa16.64■□□□□ 0.25
CD55-209ENST00000488171 F13BP05160 661 aa16.64■□□□□ 0.25
CD55-209ENST00000488171 ERCC1P07992 297 aaPredicted RBP16.64■□□□□ 0.25
CD55-209ENST00000488171 QDPRP09417 244 aa16.64■□□□□ 0.25
CD55-209ENST00000488171 ZNF23P17027 643 aa16.64■□□□□ 0.25
CD55-209ENST00000488171 FUT1P19526 365 aa16.64■□□□□ 0.25
CD55-209ENST00000488171 IGFBP5P24593 272 aa16.64■□□□□ 0.25
CD55-209ENST00000488171 IQCCQ4KMZ1 466 aa16.64■□□□□ 0.25
CD55-209ENST00000488171 CYBRD1Q53TN4 286 aa16.64■□□□□ 0.25
CD55-209ENST00000488171 TMEM239Q8WW34 195 aa16.64■□□□□ 0.25
CD55-209ENST00000488171 SEPHS2Q99611 448 aa16.64■□□□□ 0.25
CD55-209ENST00000488171 SH3GL3Q99963 347 aa16.64■□□□□ 0.25
CD55-209ENST00000488171 SOX7Q9BT81 388 aa16.64■□□□□ 0.25
CD55-209ENST00000488171 MRPL13Q9BYD1 178 aaKnown RBP16.64■□□□□ 0.25
CD55-209ENST00000488171 TPK1Q9H3S4 243 aa16.64■□□□□ 0.25
CD55-209ENST00000488171 SYNGR3O43761 229 aa16.63■□□□□ 0.25
CD55-209ENST00000488171 IFNA14P01570 189 aa16.63■□□□□ 0.25
CD55-209ENST00000488171 IGHG1P01857 330 aa16.63■□□□□ 0.25
CD55-209ENST00000488171 VIMP08670 466 aaKnown RBP16.63■□□□□ 0.25
CD55-209ENST00000488171 TSPAN19P0C672 248 aa16.63■□□□□ 0.25
CD55-209ENST00000488171 KDELR2P33947 212 aa16.63■□□□□ 0.25
CD55-209ENST00000488171 CLRN1P58418 232 aa16.63■□□□□ 0.25
CD55-209ENST00000488171 FAM166AQ6J272 317 aa16.63■□□□□ 0.25
CD55-209ENST00000488171 LRP11Q86VZ4 500 aa16.63■□□□□ 0.25
CD55-209ENST00000488171 ZNF786Q8N393 782 aa16.63■□□□□ 0.25
CD55-209ENST00000488171 PCYOX1LQ8NBM8 494 aa16.63■□□□□ 0.25
CD55-209ENST00000488171 LIPHQ8WWY8 451 aa16.63■□□□□ 0.25
CD55-209ENST00000488171 ASB10Q8WXI3 467 aa16.63■□□□□ 0.25
CD55-209ENST00000488171 MCHR2Q969V1 340 aa16.63■□□□□ 0.25
CD55-209ENST00000488171 SGTBQ96EQ0 304 aa16.63■□□□□ 0.25
CD55-209ENST00000488171 ZNF347Q96SE7 839 aa16.63■□□□□ 0.25
CD55-209ENST00000488171 SYT3Q9BQG1 590 aa16.63■□□□□ 0.25
CD55-209ENST00000488171 BEX2Q9BXY8 128 aa16.63■□□□□ 0.25
CD55-209ENST00000488171 GID8Q9NWU2 228 aa16.63■□□□□ 0.25
CD55-209ENST00000488171 LPAR3Q9UBY5 353 aa16.63■□□□□ 0.25
CD55-209ENST00000488171 MALRD1Q5VYJ5 2156 aa16.62■□□□□ 0.25
CD55-209ENST00000488171 LOC100289279A0A1B0GTE1 492 aa16.62■□□□□ 0.25
CD55-209ENST00000488171 A0A1W2PRG6 482 aa16.62■□□□□ 0.25
CD55-209ENST00000488171 LRP5LA4QPB2 252 aa16.62■□□□□ 0.25
CD55-209ENST00000488171 ENTPD5O75356 428 aa16.62■□□□□ 0.25
CD55-209ENST00000488171 THRBP10828 461 aa16.62■□□□□ 0.25
CD55-209ENST00000488171 AQP2P41181 271 aa16.62■□□□□ 0.25
CD55-209ENST00000488171 MYBPC1Q00872 1141 aa16.62■□□□□ 0.25
CD55-209ENST00000488171 GALK2Q01415 458 aa16.62■□□□□ 0.25
CD55-209ENST00000488171 GUCY1A3Q02108 690 aa16.62■□□□□ 0.25
CD55-209ENST00000488171 LRRC23Q53EV4 343 aaPredicted RBP16.62■□□□□ 0.25
CD55-209ENST00000488171 GKAP1Q5VSY0 366 aaPredicted RBP16.62■□□□□ 0.25
CD55-209ENST00000488171 NOXO1Q8NFA2 376 aa16.62■□□□□ 0.25
CD55-209ENST00000488171 OR2T12Q8NG77 320 aa16.62■□□□□ 0.25
CD55-209ENST00000488171 OR4K5Q8NGD3 323 aa16.62■□□□□ 0.25
CD55-209ENST00000488171 MOSPD2Q8NHP6 518 aa16.62■□□□□ 0.25
CD55-209ENST00000488171 UBASH3BQ8TF42 649 aa16.62■□□□□ 0.25
CD55-209ENST00000488171 SHARPINQ9H0F6 387 aa16.62■□□□□ 0.25
CD55-209ENST00000488171 MYEF2Q9P2K5 600 aaKnown RBP16.62■□□□□ 0.25
CD55-209ENST00000488171 REV1Q9UBZ9 1251 aa16.62■□□□□ 0.25
CD55-209ENST00000488171 SLC7A8Q9UHI5 535 aa16.62■□□□□ 0.25
CD55-209ENST00000488171 ATRQ13535 2644 aa16.61■□□□□ 0.25
CD55-209ENST00000488171 LYNX1G3V0Z9 82 aa16.61■□□□□ 0.25
CD55-209ENST00000488171 M0R233 179 aa16.61■□□□□ 0.25
CD55-209ENST00000488171 LILRA1O75019 489 aa16.61■□□□□ 0.25
CD55-209ENST00000488171 TRMUO75648 421 aaKnown RBP16.61■□□□□ 0.25
CD55-209ENST00000488171 TACSTD2P09758 323 aa16.61■□□□□ 0.25
CD55-209ENST00000488171 LYNX1P0DP58 116 aa16.61■□□□□ 0.25
CD55-209ENST00000488171 ALDH3B1P43353 468 aa16.61■□□□□ 0.25
CD55-209ENST00000488171 RPS23P62266 143 aaKnown RBP16.61■□□□□ 0.25
CD55-209ENST00000488171 RIN1Q13671 783 aa16.61■□□□□ 0.25
CD55-209ENST00000488171 NRN1LQ496H8 165 aa16.61■□□□□ 0.25
CD55-209ENST00000488171 MICU2Q8IYU8 434 aa16.61■□□□□ 0.25
CD55-209ENST00000488171 PAQR4Q8N4S7 273 aaPredicted RBP16.61■□□□□ 0.25
CD55-209ENST00000488171 SYT14Q8NB59 555 aa16.61■□□□□ 0.25
CD55-209ENST00000488171 RCN3Q96D15 328 aa16.61■□□□□ 0.25
CD55-209ENST00000488171 CCDC134Q9H6E4 229 aa16.61■□□□□ 0.25
CD55-209ENST00000488171 CHODLQ9H9P2 273 aa16.61■□□□□ 0.25
CD55-209ENST00000488171 INIPQ9NRY2 104 aa16.61■□□□□ 0.25
CD55-209ENST00000488171 ARMCX1Q9P291 453 aa16.61■□□□□ 0.25
CD55-209ENST00000488171 GMPR2Q9P2T1 348 aaKnown RBP16.61■□□□□ 0.25
CD55-209ENST00000488171 KCNS2Q9ULS6 477 aa16.61■□□□□ 0.25
CD55-209ENST00000488171 FZR1Q9UM11 496 aa16.61■□□□□ 0.25
CD55-209ENST00000488171 MED31Q9Y3C7 131 aa16.61■□□□□ 0.25
CD55-209ENST00000488171 CAPN7Q9Y6W3 813 aa16.61■□□□□ 0.25
CD55-209ENST00000488171 RTTNQ86VV8 2226 aa16.61■□□□□ 0.25
CD55-209ENST00000488171 RNF212BA8MTL3 300 aa16.6■□□□□ 0.25
CD55-209ENST00000488171 CENPBD1B2RD01 187 aa16.6■□□□□ 0.25
CD55-209ENST00000488171 MCIDASD6RGH6 385 aa16.6■□□□□ 0.25
CD55-209ENST00000488171 PIP5K1CO60331 668 aa16.6■□□□□ 0.25
CD55-209ENST00000488171 FARS2O95363 451 aaKnown RBP16.6■□□□□ 0.25
CD55-209ENST00000488171 ACADSP16219 412 aa16.6■□□□□ 0.25
CD55-209ENST00000488171 FUT4P22083 530 aa16.6■□□□□ 0.25
CD55-209ENST00000488171 IL2RGP31785 369 aa16.6■□□□□ 0.25
CD55-209ENST00000488171 DAP3P51398 398 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms