RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 NIPAL3Q6P499 406 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 C11orf88Q6PI97 169 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 ARL9Q6T311 187 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 SPNS3Q6ZMD2 512 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 SSX6Q7RTT6 188 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 TMPRSS11BQ86T26 416 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 VRK3Q8IV63 474 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 BAP18Q8IXM2 172 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 IZUMO1Q8IYV9 350 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 PRSS35Q8N3Z0 413 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 BOLLQ8N9W6 283 aaKnown RBP4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 C17orf47Q8NEP4 570 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 OR2L5Q8NG80 312 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 OR4C16Q8NGL9 310 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 OR9A4Q8NGU2 314 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 OR56A3Q8NH54 315 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 SLC38A5Q8WUX1 472 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 HMGB4Q8WW32 186 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 RSC1A1Q92681 617 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 SLC25A36Q96CQ1 311 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 HAVCR1Q96D42 359 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 NEURL3Q96EH8 262 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 TMEM19Q96HH6 336 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 S100A13Q99584 98 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 TEX12Q9BXU0 123 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 LINC00597Q9H2U6 94 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 MYNNQ9NPC7 610 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 CUTCQ9NTM9 273 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 ANKRD10Q9NXR5 420 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 ARL15Q9NXU5 204 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 IL17CQ9P0M4 197 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 NCDNQ9UBB6 729 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 MTFP1Q9UDX5 166 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 ST6GALNAC2Q9UJ37 374 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 KCNE5Q9UJ90 142 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 ICKQ9UPZ9 632 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 TMED3Q9Y3Q3 217 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 ETV7Q9Y603 341 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 THSD7BQ9C0I4 1608 aa4.32□□□□□ -1.72
CDC42BPA-213ENST00000488131 CCDC187A0A096LP49 1063 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 hCG_1809904A0A1W2PP81 198 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 A0A1W2PR64 198 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 A0A1W2PRV1 198 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 TBC1D3BA6NDS4 549 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 IFITM5A6NNB3 132 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 ZNF705EA8MWA4 302 aaPredicted RBP4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 A8MWP6 167 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 VSTM5A8MXK1 200 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 F5H0A9 414 aaPredicted RBP4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 RNASEK-C17orf49H0YIS7 233 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 HRKO00198 91 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 GAPDHSO14556 408 aaPredicted RBP4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 SLC16A5O15375 505 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 MAGEB4O15481 346 aaPredicted RBP4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 INSIG1O15503 277 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 OGG1O15527 345 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 PIP5K1CO60331 668 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 FMO6PO60774 539 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 CTNSO60931 367 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 MOSPD3O75425 235 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 SLC25A14O95258 325 aaPredicted RBP4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 GBAP04062 536 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 SPARCP09486 303 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 TBC1D3HP0C7X1 549 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 ALPPL2P10696 532 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 CD1CP29017 333 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 PCSK1P29120 753 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 AHRP35869 848 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 RBM34P42696 430 aaKnown RBP4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 PPM1FP49593 454 aaPredicted RBP4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 GPR15P49685 360 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 PNLIPRP1P54315 467 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 BACE1P56817 501 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 ST8SIA6P61647 398 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 RAB1AP62820 205 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 EIF5AP63241 154 aaKnown RBP4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 CHIT1Q13231 466 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 DOC2AQ14183 400 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 RSU1Q15404 277 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 LY6KQ17RY6 165 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 DEFB115Q30KQ5 88 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 AARDQ4LEZ3 155 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 AWAT1Q58HT5 328 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 SAPCD1Q5SSQ6 148 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 TMEM69Q5SWH9 247 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 LYPLAL1Q5VWZ2 237 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 NKAIN2Q5VXU1 208 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 TBC1D3GQ6DHY5 549 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 AWAT2Q6E213 333 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 GRHL2Q6ISB3 625 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 PWWP2BQ6NUJ5 590 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 FAAP20Q6NZ36 180 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 DHRS11Q6UWP2 260 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 UNQ9370/PRO34162Q6UXP9 181 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 HEPN1Q6WQI6 88 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 ZNF620Q6ZNG0 422 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 HIST2H3AQ71DI3 136 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 DPPA4Q7L190 304 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 DCXRQ7Z4W1 244 aa4.31□□□□□ -1.72
CDC42BPA-213ENST00000488131 MRPL52Q86TS9 123 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms