RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 FGF21Q9NSA1 209 aa23.62■■□□□ 1.37
HLA-C-208ENST00000487245 SRPK3Q9UPE1 567 aa23.62■■□□□ 1.37
HLA-C-208ENST00000487245 U3KQ87 197 aa23.62■■□□□ 1.37
HLA-C-208ENST00000487245 ACOT7O00154 380 aa23.61■■□□□ 1.37
HLA-C-208ENST00000487245 NOS1APO75052 506 aaPredicted RBP23.61■■□□□ 1.37
HLA-C-208ENST00000487245 ADRA2CP18825 462 aa23.61■■□□□ 1.37
HLA-C-208ENST00000487245 ALOX5APP20292 161 aa23.61■■□□□ 1.37
HLA-C-208ENST00000487245 C1orf189Q5VU69 101 aa23.61■■□□□ 1.37
HLA-C-208ENST00000487245 METTL11BQ5VVY1 283 aa23.61■■□□□ 1.37
HLA-C-208ENST00000487245 MTFR2Q6P444 385 aa23.61■■□□□ 1.37
HLA-C-208ENST00000487245 MS4A3Q96HJ5 214 aa23.61■■□□□ 1.37
HLA-C-208ENST00000487245 RTN4RQ9BZR6 473 aa23.61■■□□□ 1.37
HLA-C-208ENST00000487245 ZNF346Q9UL40 294 aaKnown RBP23.61■■□□□ 1.37
HLA-C-208ENST00000487245 MPDZO75970 2070 aa23.61■■□□□ 1.37
HLA-C-208ENST00000487245 DCTN6O00399 190 aa23.6■■□□□ 1.37
HLA-C-208ENST00000487245 TOX3O15405 576 aaPredicted RBP23.6■■□□□ 1.37
HLA-C-208ENST00000487245 SSNA1O43805 119 aa23.6■■□□□ 1.37
HLA-C-208ENST00000487245 RPP14O95059 124 aaKnown RBP23.6■■□□□ 1.37
HLA-C-208ENST00000487245 ABCD3P28288 659 aa23.6■■□□□ 1.37
HLA-C-208ENST00000487245 MAGEB1P43366 347 aa23.6■■□□□ 1.37
HLA-C-208ENST00000487245 P2RX1P51575 399 aa23.6■■□□□ 1.37
HLA-C-208ENST00000487245 MECP2P51608 486 aaKnown RBP23.6■■□□□ 1.37
HLA-C-208ENST00000487245 POLR2HP52434 150 aaKnown RBP23.6■■□□□ 1.37
HLA-C-208ENST00000487245 P2RX3P56373 397 aa23.6■■□□□ 1.37
HLA-C-208ENST00000487245 ZP1P60852 638 aa23.6■■□□□ 1.37
HLA-C-208ENST00000487245 TMEM69Q5SWH9 247 aa23.6■■□□□ 1.37
HLA-C-208ENST00000487245 FDX2Q6P4F2 183 aa23.6■■□□□ 1.37
HLA-C-208ENST00000487245 ZNF436Q9C0F3 470 aaPredicted RBP23.6■■□□□ 1.37
HLA-C-208ENST00000487245 TGIF2Q9GZN2 237 aa23.6■■□□□ 1.37
HLA-C-208ENST00000487245 LAMP5Q9UJQ1 280 aa23.6■■□□□ 1.37
HLA-C-208ENST00000487245 SPAG17Q6Q759 2223 aa23.6■■□□□ 1.37
HLA-C-208ENST00000487245 CDC14CA4D256 554 aa23.6■■□□□ 1.37
HLA-C-208ENST00000487245 LINC00862A6NCI5 91 aa23.6■■□□□ 1.37
HLA-C-208ENST00000487245 TMEM212A6NML5 194 aa23.6■■□□□ 1.37
HLA-C-208ENST00000487245 SLC22A5O76082 557 aa23.6■■□□□ 1.37
HLA-C-208ENST00000487245 NUDT14O95848 222 aa23.6■■□□□ 1.37
HLA-C-208ENST00000487245 HPXP02790 462 aa23.6■■□□□ 1.37
HLA-C-208ENST00000487245 CSRP1P21291 193 aaKnown RBP23.6■■□□□ 1.37
HLA-C-208ENST00000487245 OR2G2Q8NGZ5 317 aa23.6■■□□□ 1.37
HLA-C-208ENST00000487245 ZNF417Q8TAU3 575 aa23.6■■□□□ 1.37
HLA-C-208ENST00000487245 CLDN23Q96B33 292 aa23.6■■□□□ 1.37
HLA-C-208ENST00000487245 NPDC1Q9NQX5 325 aaPredicted RBP23.6■■□□□ 1.37
HLA-C-208ENST00000487245 GIMD1P0DJR0 217 aa23.59■■□□□ 1.37
HLA-C-208ENST00000487245 DNASE1P24855 282 aa23.59■■□□□ 1.37
HLA-C-208ENST00000487245 CAMK2BQ13554 666 aa23.59■■□□□ 1.37
HLA-C-208ENST00000487245 TMEM255AQ5JRV8 349 aa23.59■■□□□ 1.37
HLA-C-208ENST00000487245 SFRP4Q6FHJ7 346 aaPredicted RBP23.59■■□□□ 1.37
HLA-C-208ENST00000487245 PRSS58Q8IYP2 241 aa23.59■■□□□ 1.37
HLA-C-208ENST00000487245 SIX5Q8N196 739 aa23.59■■□□□ 1.37
HLA-C-208ENST00000487245 ZNF680Q8NEM1 530 aa23.59■■□□□ 1.37
HLA-C-208ENST00000487245 KLHDC3Q9BQ90 382 aa23.59■■□□□ 1.37
HLA-C-208ENST00000487245 AUP1Q9Y679 476 aa23.59■■□□□ 1.37
HLA-C-208ENST00000487245 FKBP7Q9Y680 259 aa23.59■■□□□ 1.37
HLA-C-208ENST00000487245 FADS1O60427 444 aa23.58■■□□□ 1.37
HLA-C-208ENST00000487245 KHDRBS3O75525 346 aaKnown RBP23.58■■□□□ 1.37
HLA-C-208ENST00000487245 CENPAP49450 140 aa23.58■■□□□ 1.37
HLA-C-208ENST00000487245 CLDN12P56749 244 aa23.58■■□□□ 1.37
HLA-C-208ENST00000487245 DMWDQ09019 674 aa23.58■■□□□ 1.37
HLA-C-208ENST00000487245 RASGEF1BQ0VAM2 473 aa23.58■■□□□ 1.37
HLA-C-208ENST00000487245 ESCO2Q56NI9 601 aa23.58■■□□□ 1.37
HLA-C-208ENST00000487245 C5orf46Q6UWT4 87 aa23.58■■□□□ 1.37
HLA-C-208ENST00000487245 MISPQ8IVT2 679 aa23.58■■□□□ 1.37
HLA-C-208ENST00000487245 BEST4Q8NFU0 473 aa23.58■■□□□ 1.37
HLA-C-208ENST00000487245 MARVELD3Q96A59 401 aa23.58■■□□□ 1.37
HLA-C-208ENST00000487245 INTS14Q96SY0 518 aa23.58■■□□□ 1.37
HLA-C-208ENST00000487245 COMMD4Q9H0A8 199 aa23.58■■□□□ 1.37
HLA-C-208ENST00000487245 TP53BP1Q12888 1972 aaPredicted RBP23.58■■□□□ 1.37
HLA-C-208ENST00000487245 A0A087WV48 116 aa23.58■■□□□ 1.36
HLA-C-208ENST00000487245 XKRYO14609 159 aa23.58■■□□□ 1.36
HLA-C-208ENST00000487245 AKR7A3O95154 331 aa23.58■■□□□ 1.36
HLA-C-208ENST00000487245 SYPP08247 313 aa23.58■■□□□ 1.36
HLA-C-208ENST00000487245 CDK2P24941 298 aa23.58■■□□□ 1.36
HLA-C-208ENST00000487245 TAS2R20P59543 309 aa23.58■■□□□ 1.36
HLA-C-208ENST00000487245 TOMM34Q15785 309 aaPredicted RBP23.58■■□□□ 1.36
HLA-C-208ENST00000487245 SGCBQ16585 318 aa23.58■■□□□ 1.36
HLA-C-208ENST00000487245 STPG1Q5TH74 334 aa23.58■■□□□ 1.36
HLA-C-208ENST00000487245 RABEPKQ7Z6M1 372 aa23.58■■□□□ 1.36
HLA-C-208ENST00000487245 SPICQ8N5J4 248 aa23.58■■□□□ 1.36
HLA-C-208ENST00000487245 GPR148Q8TDV2 347 aa23.58■■□□□ 1.36
HLA-C-208ENST00000487245 NXPE2Q96DL1 559 aa23.58■■□□□ 1.36
HLA-C-208ENST00000487245 TAS2R5Q9NYW4 299 aa23.58■■□□□ 1.36
HLA-C-208ENST00000487245 ABCA7Q8IZY2 2146 aa23.57■■□□□ 1.36
HLA-C-208ENST00000487245 TMED7-TICAM2A0A0A6YYA0 188 aa23.57■■□□□ 1.36
HLA-C-208ENST00000487245 TSC22D2O75157 780 aa23.57■■□□□ 1.36
HLA-C-208ENST00000487245 GLSO94925 669 aaPredicted RBP23.57■■□□□ 1.36
HLA-C-208ENST00000487245 IL5P05113 134 aa23.57■■□□□ 1.36
HLA-C-208ENST00000487245 CXCL12P48061 93 aa23.57■■□□□ 1.36
HLA-C-208ENST00000487245 LGALSLQ3ZCW2 172 aaPredicted RBP23.57■■□□□ 1.36
HLA-C-208ENST00000487245 PTCRAQ6ISU1 281 aaPredicted RBP23.57■■□□□ 1.36
HLA-C-208ENST00000487245 SERPINA12Q8IW75 414 aa23.57■■□□□ 1.36
HLA-C-208ENST00000487245 STK35Q8TDR2 534 aa23.57■■□□□ 1.36
HLA-C-208ENST00000487245 HLA-CQ95604 372 aa23.57■■□□□ 1.36
HLA-C-208ENST00000487245 DACT3Q96B18 629 aaPredicted RBP23.57■■□□□ 1.36
HLA-C-208ENST00000487245 TAS2R10Q9NYW0 307 aa23.57■■□□□ 1.36
HLA-C-208ENST00000487245 MRPL15Q9P015 296 aaKnown RBP23.57■■□□□ 1.36
HLA-C-208ENST00000487245 TMED7Q9Y3B3 224 aa23.57■■□□□ 1.36
HLA-C-208ENST00000487245 TVP23AA6NH52 213 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 A8MVM7 634 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 CPN1P15169 458 aa23.56■■□□□ 1.36
HLA-C-208ENST00000487245 ARRB1P49407 418 aaPredicted RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms