RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 MUCL1Q96DR8 90 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 CCDC126Q96EE4 140 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 GIMAP5Q96F15 307 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 RADILQ96JH8 1075 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 EGLN2Q96KS0 407 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 KLHL15Q96M94 604 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 RNF145Q96MT1 663 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 ZNF385AQ96PM9 386 aaKnown RBP3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 TNFRSF13CQ96RJ3 184 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 EPYCQ99645 322 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 POTEKPQ9BYX7 375 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 HOXD1Q9GZZ0 328 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 CDC42EP4Q9H3Q1 356 aaKnown RBP3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 MID1IP1Q9NPA3 183 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 RRAGDQ9NQL2 400 aaPredicted RBP3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 ACSS1Q9NUB1 689 aaPredicted RBP3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 GIN1Q9NXP7 522 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 CISD1Q9NZ45 108 aaKnown RBP3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 TMEM216Q9P0N5 145 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 B3GALT5Q9Y2C3 310 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 TIMM22Q9Y584 194 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 MAGED1Q9Y5V3 778 aaPredicted RBP3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 DYSFO75923 2080 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 IGHV4-30-2A0A087WSY4 118 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 EXOC1LA0A1B0GW35 172 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 ZNF724A8MTY0 619 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 SHISA9B4DS77 424 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 H3BNH8 94 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 KIF2AO00139 706 aaPredicted RBP3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 UBFD1O14562 309 aaKnown RBP3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 HSPA12AO43301 675 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 SLC25A17O43808 307 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 SSX4O60224 188 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 GPRIN2O60269 458 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 RAMP1O60894 148 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 NDUFS7O75251 213 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 SEC22BO75396 215 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 PGM3O95394 542 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 CRYAAP02489 173 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 GSTA1P08263 222 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 ALOX5P09917 674 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 UROSP10746 265 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 ACP2P11117 423 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 SLC25A16P16260 332 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 ANOS1P23352 680 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 SHC1P29353 583 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 SFTPDP35247 375 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 SERPINF1P36955 418 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 GPR12P47775 334 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 OR3A2P47893 321 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 P2RX1P51575 399 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 FOXA1P55317 472 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 VLDLRP98155 873 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 ZNF117Q03924 483 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 CKAP4Q07065 602 aaKnown RBP3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 HSPB3Q12988 150 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 SELENBP1Q13228 472 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 PPA1Q15181 289 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 RAB35Q15286 201 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 TSC22D1Q15714 1073 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 CD226Q15762 336 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 EFNB3Q15768 340 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 DUSP5Q16690 384 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 TMEM249Q2WGJ8 235 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 KLHL26Q53HC5 615 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 SLC25A53Q5H9E4 307 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 PAPPA-AS1Q5QFB9 102 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 TIMM23BQ5SRD1 257 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 C6orf52Q5T4I8 152 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 C1QTNF12Q5T7M4 302 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 CYB5R2Q6BCY4 276 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 C11orf71Q6IPW1 123 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 CLEC2AQ6UVW9 174 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 RNF165Q6ZSG1 346 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 Q6ZSR9 355 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 CCNYL1Q8N7R7 359 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 CEP112Q8N8E3 955 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 BANPQ8N9N5 519 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 GATSQ8NAP1 163 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 KBTBD8Q8NFY9 601 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 GPR119Q8TDV5 335 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 ACMSDQ8TDX5 336 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 MTERF3Q96E29 417 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 SH3YL1Q96HL8 342 aaPredicted RBP3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 MS4A4EQ96PG1 132 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 KCNA7Q96RP8 456 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 STACQ99469 402 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 FMO2Q99518 471 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 CCT7Q99832 543 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 DHRS9Q9BPW9 319 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 KLHDC3Q9BQ90 382 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 PSD2Q9BQI7 771 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 BEX2Q9BXY8 128 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 SRXN1Q9BYN0 137 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 PIGUQ9H490 435 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 REEP4Q9H6H4 257 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 TMEM185BQ9H7F4 350 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 ZNF696Q9H7X3 374 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 COQ10BQ9H8M1 238 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 GRPEL1Q9HAV7 217 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms