RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 OR51G2Q8NGK0 314 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 RFKQ969G6 155 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 ZNF649Q9BS31 505 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 RERGLQ9H628 205 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 FOXD3Q9UJU5 478 aaPredicted RBP12.89□□□□□ -0.35
LRIF1-202ENST00000485275 B9D1Q9UPM9 204 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 COMMD3-BMI1R4GMX3 469 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 SLC22A20A6NK97 555 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 SLC22A31A6NKX4 558 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 SELENOFO60613 162 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 SLC16A7O60669 478 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 SYNGR4O95473 234 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 IGHG1P01857 330 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 PCMT1P22061 227 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 MAP2K4P45985 399 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 CSNK2BP67870 215 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 KLRB1Q12918 225 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 GGTLC2Q14390 218 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 ACSF3Q4G176 576 aaPredicted RBP12.89□□□□□ -0.35
LRIF1-202ENST00000485275 XAF1Q6GPH4 301 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 RPRMLQ8N4K4 120 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 ZNF511Q8NB15 262 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 PROKR2Q8NFJ6 384 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 OR6K6Q8NGW6 343 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 IPCEF1Q8WWN9 437 aaPredicted RBP12.89□□□□□ -0.35
LRIF1-202ENST00000485275 DOCK7Q96N67 2140 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 ALG12Q9BV10 488 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 RNF122Q9H9V4 155 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 BCO1Q9HAY6 547 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 WARS2Q9UGM6 360 aaKnown RBP12.89□□□□□ -0.35
LRIF1-202ENST00000485275 EXOGQ9Y2C4 368 aaKnown RBP12.89□□□□□ -0.35
LRIF1-202ENST00000485275 RELNP78509 3460 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 FREM1Q5H8C1 2179 aa12.89□□□□□ -0.35
LRIF1-202ENST00000485275 KALRNO60229 2985 aa12.88□□□□□ -0.35
LRIF1-202ENST00000485275 EFCAB10A6NFE3 127 aa12.88□□□□□ -0.35
LRIF1-202ENST00000485275 RGS10O43665 173 aa12.88□□□□□ -0.35
LRIF1-202ENST00000485275 GLCEO94923 617 aa12.88□□□□□ -0.35
LRIF1-202ENST00000485275 FADS2O95864 444 aaKnown RBP12.88□□□□□ -0.35
LRIF1-202ENST00000485275 TFAP2AP05549 437 aa12.88□□□□□ -0.35
LRIF1-202ENST00000485275 CD79BP40259 229 aa12.88□□□□□ -0.35
LRIF1-202ENST00000485275 NAA10P41227 235 aaPredicted RBP12.88□□□□□ -0.35
LRIF1-202ENST00000485275 RAB40BQ12829 278 aa12.88□□□□□ -0.35
LRIF1-202ENST00000485275 IRF3Q14653 427 aa12.88□□□□□ -0.35
LRIF1-202ENST00000485275 RTL6Q6ICC9 239 aa12.88□□□□□ -0.35
LRIF1-202ENST00000485275 LRFN4Q6PJG9 635 aa12.88□□□□□ -0.35
LRIF1-202ENST00000485275 SEM1Q6ZVN7 128 aa12.88□□□□□ -0.35
LRIF1-202ENST00000485275 LINGO2Q7L985 606 aa12.88□□□□□ -0.35
LRIF1-202ENST00000485275 PRSS48Q7RTY5 328 aa12.88□□□□□ -0.35
LRIF1-202ENST00000485275 OR2T4Q8NH00 348 aa12.88□□□□□ -0.35
LRIF1-202ENST00000485275 HTRA1Q92743 480 aa12.88□□□□□ -0.35
LRIF1-202ENST00000485275 TMEM54Q969K7 222 aa12.88□□□□□ -0.35
LRIF1-202ENST00000485275 ADAD1Q96M93 576 aaKnown RBP12.88□□□□□ -0.35
LRIF1-202ENST00000485275 TRIB1Q96RU8 372 aa12.88□□□□□ -0.35
LRIF1-202ENST00000485275 CCDC90BQ9GZT6 254 aa12.88□□□□□ -0.35
LRIF1-202ENST00000485275 MRPL22Q9NWU5 206 aaKnown RBP12.88□□□□□ -0.35
LRIF1-202ENST00000485275 HAO2Q9NYQ3 351 aa12.88□□□□□ -0.35
LRIF1-202ENST00000485275 H2AFY2Q9P0M6 372 aaPredicted RBP12.88□□□□□ -0.35
LRIF1-202ENST00000485275 KLHL9Q9P2J3 617 aa12.88□□□□□ -0.35
LRIF1-202ENST00000485275 CLEC2DQ9UHP7 191 aa12.88□□□□□ -0.35
LRIF1-202ENST00000485275 ZNF175Q9Y473 711 aa12.88□□□□□ -0.35
LRIF1-202ENST00000485275 FKBP7Q9Y680 259 aa12.88□□□□□ -0.35
LRIF1-202ENST00000485275 ARHGAP21Q5T5U3 1957 aa12.88□□□□□ -0.35
LRIF1-202ENST00000485275 SPTA1P02549 2419 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 SHANK1Q9Y566 2161 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 TVP23AA6NH52 213 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 ERVH48-1M5A8F1 160 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 UPK3AO75631 287 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 MPZL1O95297 269 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 SCG5P05408 212 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 SBK2P0C263 348 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 GAAP10253 952 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 PTGS2P35354 604 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 RPS27P42677 84 aaKnown RBP12.87□□□□□ -0.35
LRIF1-202ENST00000485275 HCCSP53701 268 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 CLRN1P58418 232 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 BLMHQ13867 455 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 KRTCAP3Q53RY4 240 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 SLC35D3Q5M8T2 416 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 RPTNQ6XPR3 784 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 CHMP1BQ7LBR1 199 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 CD163Q86VB7 1156 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 C9orf106Q8NAJ2 232 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 NSMAFQ92636 917 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 MCHR2Q969V1 340 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 TMEM45BQ96B21 275 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 ZNF837Q96EG3 531 aaPredicted RBP12.87□□□□□ -0.35
LRIF1-202ENST00000485275 MRPS26Q9BYN8 205 aaKnown RBP12.87□□□□□ -0.35
LRIF1-202ENST00000485275 PRRG4Q9BZD6 226 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 RACGAP1Q9H0H5 632 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 WDR76Q9H967 626 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 FGF20Q9NP95 211 aaPredicted RBP12.87□□□□□ -0.35
LRIF1-202ENST00000485275 DIMT1Q9UNQ2 313 aaKnown RBP12.87□□□□□ -0.35
LRIF1-202ENST00000485275 RCE1Q9Y256 329 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 COA3Q9Y2R0 106 aaPredicted RBP12.87□□□□□ -0.35
LRIF1-202ENST00000485275 FAM215AQ9Y5M1 114 aa12.87□□□□□ -0.35
LRIF1-202ENST00000485275 A0A087WXM4 84 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 ZNF726A6NNF4 738 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 PTHP01270 115 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 IGHA1P01876 353 aa12.86□□□□□ -0.35
LRIF1-202ENST00000485275 AGTR1P30556 359 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms