RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 ACOT1Q86TX2 421 aa2.53□□□□□ -2
COMMD3-213ENST00000483684 TGIF2LXQ8IUE1 241 aa2.53□□□□□ -2
COMMD3-213ENST00000483684 CDKL3Q8IVW4 592 aaPredicted RBP2.53□□□□□ -2
COMMD3-213ENST00000483684 FAM86B1Q8N7N1 296 aa2.53□□□□□ -2
COMMD3-213ENST00000483684 ASCC1Q8N9N2 400 aaKnown RBP2.53□□□□□ -2
COMMD3-213ENST00000483684 ZSCAN4Q8NAM6 433 aaPredicted RBP2.53□□□□□ -2
COMMD3-213ENST00000483684 STXBP6Q8NFX7 210 aa2.53□□□□□ -2
COMMD3-213ENST00000483684 OR4K14Q8NGD5 310 aa2.53□□□□□ -2
COMMD3-213ENST00000483684 MAGEE2Q8TD90 523 aaPredicted RBP2.53□□□□□ -2
COMMD3-213ENST00000483684 SLC35B4Q969S0 331 aa2.53□□□□□ -2
COMMD3-213ENST00000483684 FAHD2AQ96GK7 314 aa2.53□□□□□ -2
COMMD3-213ENST00000483684 TSNARE1Q96NA8 513 aa2.53□□□□□ -2
COMMD3-213ENST00000483684 TRNT1Q96Q11 434 aaKnown RBP2.53□□□□□ -2
COMMD3-213ENST00000483684 COPS8Q99627 209 aa2.53□□□□□ -2
COMMD3-213ENST00000483684 KCNS3Q9BQ31 491 aa2.53□□□□□ -2
COMMD3-213ENST00000483684 C9orf16Q9BUW7 83 aa2.53□□□□□ -2
COMMD3-213ENST00000483684 CHIAQ9BZP6 476 aa2.53□□□□□ -2
COMMD3-213ENST00000483684 SHCBP1LQ9BZQ2 653 aa2.53□□□□□ -2
COMMD3-213ENST00000483684 DRC3Q9H069 523 aa2.53□□□□□ -2
COMMD3-213ENST00000483684 NXF3Q9H4D5 531 aaKnown RBP2.53□□□□□ -2
COMMD3-213ENST00000483684 NIPAL2Q9H841 368 aa2.53□□□□□ -2
COMMD3-213ENST00000483684 ZNF160Q9HCG1 818 aa2.53□□□□□ -2
COMMD3-213ENST00000483684 NT5MQ9NPB1 228 aa2.53□□□□□ -2
COMMD3-213ENST00000483684 SLC17A5Q9NRA2 495 aa2.53□□□□□ -2
COMMD3-213ENST00000483684 AHSPQ9NZD4 102 aa2.53□□□□□ -2
COMMD3-213ENST00000483684 GCNT4Q9P109 453 aa2.53□□□□□ -2
COMMD3-213ENST00000483684 STX18Q9P2W9 335 aaKnown RBP2.53□□□□□ -2
COMMD3-213ENST00000483684 TBC1D24Q9ULP9 559 aa2.53□□□□□ -2
COMMD3-213ENST00000483684 PRG3Q9Y2Y8 225 aaPredicted RBP2.53□□□□□ -2
COMMD3-213ENST00000483684 AK6Q9Y3D8 172 aaKnown RBP2.53□□□□□ -2
COMMD3-213ENST00000483684 LOC100131303A0A0U1RQF7 123 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 GOLGA8JA6NMD2 632 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 OR5K4A6NMS3 321 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 PP2D1A8MPX8 630 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 C9JVG2 144 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 F5H6K3 240 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 GOLGA8TH3BQL2 631 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 TEX46H3BTG2 121 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 ZNF701M0R085 212 aaPredicted RBP2.52□□□□□ -2.01
COMMD3-213ENST00000483684 PSMD11O00231 422 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 HIP1O00291 1037 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 RS1O15537 224 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 TRAF3IP2O43734 574 aaPredicted RBP2.52□□□□□ -2.01
COMMD3-213ENST00000483684 CHST1O43916 411 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 NDUFS6O75380 124 aaKnown RBP2.52□□□□□ -2.01
COMMD3-213ENST00000483684 MYO1DO94832 1006 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 APOA1P02647 267 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 APOEP02649 317 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 HMGN1P05114 100 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 RETP07949 1114 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 GOLGA8HP0CJ92 632 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 CALM1P0DP23 149 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 CALM2P0DP24 149 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 CALM3P0DP25 149 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 IMPDH1P20839 514 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 PTNP21246 168 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 KITLGP21583 273 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 HOXA6P31267 233 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 HNRNPH3P31942 346 aaKnown RBP2.52□□□□□ -2.01
COMMD3-213ENST00000483684 CASP14P31944 242 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 SPAM1P38567 509 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 MAP3K8P41279 467 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 QARSP47897 775 aaKnown RBP2.52□□□□□ -2.01
COMMD3-213ENST00000483684 PPOXP50336 477 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 DAOAP59103 153 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 KLRC3Q07444 240 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 SCRN3Q0VDG4 424 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 MERTKQ12866 999 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 ITGB3BPQ13352 177 aaPredicted RBP2.52□□□□□ -2.01
COMMD3-213ENST00000483684 ITIH4Q14624 930 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 LAGE3Q14657 143 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 HNRNPA1L2Q32P51 320 aaKnown RBP2.52□□□□□ -2.01
COMMD3-213ENST00000483684 TP53I3Q53FA7 332 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 CYB5R2Q6BCY4 276 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 FAM173BQ6P4H8 233 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 SLC25A48Q6ZT89 311 aaKnown RBP2.52□□□□□ -2.01
COMMD3-213ENST00000483684 OR2L13Q8N349 312 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 DHRSXQ8N5I4 330 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 TMEM252Q8N6L7 170 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 C20orf203Q8NBC4 194 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 SDR9C7Q8NEX9 313 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 OR1L6Q8NGR2 347 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 TEX47Q8TBZ9 253 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 ZNF596Q8TC21 504 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 FAM110BQ8TC76 370 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 AENQ8WTP8 325 aaKnown RBP2.52□□□□□ -2.01
COMMD3-213ENST00000483684 CCDC12Q8WUD4 166 aaPredicted RBP2.52□□□□□ -2.01
COMMD3-213ENST00000483684 MITD1Q8WV92 249 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 MAIP1Q8WWC4 291 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 IL1F10Q8WWZ1 152 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 RDH5Q92781 318 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 SLC38A4Q969I6 547 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 MBOAT4Q96T53 435 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 CYTH2Q99418 400 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 NRTNQ99748 197 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 SPATA16Q9BXB7 569 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 C6orf62Q9GZU0 229 aaPredicted RBP2.52□□□□□ -2.01
COMMD3-213ENST00000483684 ILKAPQ9H0C8 392 aaPredicted RBP2.52□□□□□ -2.01
COMMD3-213ENST00000483684 BLZF1Q9H2G9 400 aa2.52□□□□□ -2.01
COMMD3-213ENST00000483684 C12orf10Q9HB07 376 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms