RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 AKR1C1Q04828 323 aa10.35□□□□□ -0.75
SMPD4-218ENST00000482171 CAMK2DQ13557 499 aa10.35□□□□□ -0.75
SMPD4-218ENST00000482171 MFSD13AQ14CX5 517 aa10.35□□□□□ -0.75
SMPD4-218ENST00000482171 AANATQ16613 207 aa10.35□□□□□ -0.75
SMPD4-218ENST00000482171 SLC35F3Q8IY50 421 aa10.35□□□□□ -0.75
SMPD4-218ENST00000482171 RDH10Q8IZV5 341 aa10.35□□□□□ -0.75
SMPD4-218ENST00000482171 FAM26EQ8N5C1 309 aa10.35□□□□□ -0.75
SMPD4-218ENST00000482171 ARL11Q969Q4 196 aa10.35□□□□□ -0.75
SMPD4-218ENST00000482171 BIN3Q9NQY0 253 aa10.35□□□□□ -0.75
SMPD4-218ENST00000482171 SYNGR4O95473 234 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 EEF1A1P68104 462 aaKnown RBP10.34□□□□□ -0.75
SMPD4-218ENST00000482171 ZNF616Q08AN1 781 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 HACD4Q5VWC8 232 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 MAFAQ8NHW3 353 aaPredicted RBP10.34□□□□□ -0.75
SMPD4-218ENST00000482171 IFI44Q8TCB0 444 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 ELOVL3Q9HB03 270 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 FLVCR2Q9UPI3 526 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 CHST2Q9Y4C5 530 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 TEX13DA0A0J9YY54 714 aaPredicted RBP10.34□□□□□ -0.75
SMPD4-218ENST00000482171 ARRDC5A6NEK1 342 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 HRO43593 1189 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 THBS1P07996 1170 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 CT62P0C5K7 136 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 ZNF250P15622 560 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 CRABP1P29762 137 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 POU3F4P49335 361 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 FAM53BQ14153 422 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 NKAPLQ5M9Q1 402 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 FAM27D1Q5T7N8 215 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 C9orf135Q5VTT2 229 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 GUSBP11Q6P575 273 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 OR6V1Q8N148 313 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 GPR137CQ8N3F9 429 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 NT5CQ8TCD5 201 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 TCEAL3Q969E4 200 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 EMC6Q9BV81 110 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 EIF5A2Q9GZV4 153 aaKnown RBP10.34□□□□□ -0.75
SMPD4-218ENST00000482171 EXO1Q9UQ84 846 aaKnown RBP10.34□□□□□ -0.75
SMPD4-218ENST00000482171 SLC6A5Q9Y345 797 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 NPFFR2Q9Y5X5 522 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 ZNF208O43345 1280 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 SELENOFO60613 162 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 ICOSLGO75144 302 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 SNU13P55769 128 aaKnown RBP10.34□□□□□ -0.75
SMPD4-218ENST00000482171 OR10A3P58181 314 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 HLA-BQ31612 363 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 KIRREL2Q6UWL6 708 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 C16orf47Q6ZP98 133 aaPredicted RBP10.34□□□□□ -0.75
SMPD4-218ENST00000482171 BPHLQ86WA6 291 aaPredicted RBP10.34□□□□□ -0.75
SMPD4-218ENST00000482171 TMEM99Q8N816 258 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 CNTNAP3BQ96NU0 1288 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 PDCD1LG2Q9BQ51 273 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 B4GALT7Q9UBV7 327 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 CHD5Q8TDI0 1954 aa10.34□□□□□ -0.75
SMPD4-218ENST00000482171 CD14P08571 375 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 ANXA7P20073 488 aaKnown RBP10.33□□□□□ -0.76
SMPD4-218ENST00000482171 HTR1FP30939 366 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 ACTBP60709 375 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 RAB2AP61019 212 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 ACTG1P63261 375 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 LSM11P83369 360 aaKnown RBP eCLIP10.33□□□□□ -0.766e-6■□□□□ 10.9
SMPD4-218ENST00000482171 LANCL3Q6ZV70 420 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 ABI3BPQ7Z7G0 1075 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 LINC00346Q8IVM7 164 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 LSMEM1Q8N8F7 131 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 OR14A2Q96R54 314 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 CDX2Q99626 313 aaPredicted RBP10.33□□□□□ -0.76
SMPD4-218ENST00000482171 NAA11Q9BSU3 229 aaPredicted RBP10.33□□□□□ -0.76
SMPD4-218ENST00000482171 FANCFQ9NPI8 374 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 PADI1Q9ULC6 663 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 A0A0B4J203 849 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 A6NCN8 305 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 FADS1O60427 444 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 IFNA21P01568 189 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 CLUP10909 449 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 FOLR1P15328 257 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 GDF1P27539 372 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 GPR85P60893 370 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 DCAF12Q5T6F0 453 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 OPN5Q6U736 354 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 LINC00696Q6ZRV3 163 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 RABEPKQ7Z6M1 372 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 C12orf45Q8N5I9 185 aaPredicted RBP10.33□□□□□ -0.76
SMPD4-218ENST00000482171 SIRT6Q8N6T7 355 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 GPR148Q8TDV2 347 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 FAM46BQ96A09 425 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 TEAD3Q99594 435 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 VWA8A3KMH1 1905 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 SYT7O43581 403 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 DNAJB6O75190 326 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 RGS11O94810 467 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 WDPCPO95876 746 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 HIST1H1CP16403 213 aaKnown RBP10.33□□□□□ -0.76
SMPD4-218ENST00000482171 PEBP1P30086 187 aaKnown RBP10.33□□□□□ -0.76
SMPD4-218ENST00000482171 CRYBB2P43320 205 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 CBX5P45973 191 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 DUSP2Q05923 314 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 INSL4Q14641 139 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 SVBPQ8N300 66 aa10.33□□□□□ -0.76
SMPD4-218ENST00000482171 MFSD8Q8NHS3 518 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms