RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 INSIG2Q9Y5U4 225 aa11.31□□□□□ -0.6
NDC1-202ENST00000480952 IGHV3OR16-10A0A075B7F0 116 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 A0A0G2JPF8 293 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 PLSCR5A0PG75 271 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 TMEM247A6NEH6 219 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 HNRNPCL2B2RXH8 293 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 HNRNPCL3B7ZW38 293 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 TIMM23O14925 209 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 HNRNPCL1O60812 293 aaKnown RBP11.3□□□□□ -0.6
NDC1-202ENST00000480952 SPAG7O75391 227 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 FARS2O95363 451 aaKnown RBP11.3□□□□□ -0.6
NDC1-202ENST00000480952 IGHV1-46P01743 117 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 IGHV3-13P01766 116 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 CRYBA1P05813 215 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 HNRNPCL4P0DMR1 293 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 ETFAP13804 333 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 ZNF12P17014 697 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 PUDPQ08623 228 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 LRRC74AQ0VAA2 488 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 PDCD4Q53EL6 469 aaKnown RBP11.3□□□□□ -0.6
NDC1-202ENST00000480952 FBLN7Q53RD9 439 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 ZNF362Q5T0B9 420 aaPredicted RBP11.3□□□□□ -0.6
NDC1-202ENST00000480952 JAZF1Q86VZ6 243 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 C1QL4Q86Z23 238 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 C10orf53Q8N6V4 93 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 SCAIQ8N9R8 606 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 OR52E2Q8NGJ4 325 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 OR1J1Q8NGS3 322 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 OR4F5Q8NH21 305 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 TCP10LQ8TDR4 215 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 SLC41A3Q96GZ6 507 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 DCLRE1CQ96SD1 692 aaKnown RBP11.3□□□□□ -0.6
NDC1-202ENST00000480952 EGFL7Q9UHF1 273 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 GPR45Q9Y5Y3 372 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 NPTNQ9Y639 398 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 SOX21Q9Y651 276 aaPredicted RBP11.3□□□□□ -0.6
NDC1-202ENST00000480952 ARHGAP32A7KAX9 2087 aa11.3□□□□□ -0.6
NDC1-202ENST00000480952 IGKV1D-42A0A075B6H8 117 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 IQCMA0A1B0GVH7 501 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 A0A1B0GWA3 101 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 TLDC2A0PJX2 215 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 RFXANKO14593 260 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 SNAP29O95721 258 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 LBPP18428 481 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 RAG2P55895 527 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 BIDP55957 195 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 DSTNP60981 165 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 UFM1P61960 85 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 PLP2Q04941 152 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 SLC36A2Q495M3 483 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 ALG10BQ5I7T1 473 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 NHLRC1Q6VVB1 395 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 PXKQ7Z7A4 578 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 DPPA2Q7Z7J5 298 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 KLHL36Q8N4N3 616 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 SPICQ8N5J4 248 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 DNAJA4Q8WW22 397 aaPredicted RBP11.29□□□□□ -0.6
NDC1-202ENST00000480952 SLC35B4Q969S0 331 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 TMEM19Q96HH6 336 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 TEX37Q96LM6 180 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 DIRC2Q96SL1 478 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 EPYCQ99645 322 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 CITED1Q99966 193 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 NPHS2Q9NP85 383 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 TCF7L2Q9NQB0 619 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 TMEM38BQ9NVV0 291 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 GLTPQ9NZD2 209 aa11.29□□□□□ -0.6
NDC1-202ENST00000480952 POLR3KQ9Y2Y1 108 aaPredicted RBP11.29□□□□□ -0.6
NDC1-202ENST00000480952 FAM181BA6NEQ2 426 aa11.28□□□□□ -0.6
NDC1-202ENST00000480952 HOXA3O43365 443 aaPredicted RBP11.28□□□□□ -0.6
NDC1-202ENST00000480952 MFN2O95140 757 aa11.28□□□□□ -0.6
NDC1-202ENST00000480952 BPGMP07738 259 aa11.28□□□□□ -0.6
NDC1-202ENST00000480952 MYZAPP0CAP1 466 aa11.28□□□□□ -0.6
NDC1-202ENST00000480952 IGHV4-38-2P0DP08 117 aa11.28□□□□□ -0.6
NDC1-202ENST00000480952 CCNOP22674 350 aa11.28□□□□□ -0.6
NDC1-202ENST00000480952 SLC6A9P48067 706 aa11.28□□□□□ -0.6
NDC1-202ENST00000480952 ZNF718Q3SXZ3 478 aa11.28□□□□□ -0.6
NDC1-202ENST00000480952 OLFML2AQ68BL7 652 aa11.28□□□□□ -0.6
NDC1-202ENST00000480952 ULK3Q6PHR2 472 aa11.28□□□□□ -0.6
NDC1-202ENST00000480952 WDR88Q6ZMY6 472 aa11.28□□□□□ -0.6
NDC1-202ENST00000480952 C9orf139Q6ZV77 190 aa11.28□□□□□ -0.6
NDC1-202ENST00000480952 SLC16A14Q7RTX9 510 aa11.28□□□□□ -0.6
NDC1-202ENST00000480952 PARP8Q8N3A8 854 aa11.28□□□□□ -0.6
NDC1-202ENST00000480952 ZNF781Q8N8C0 355 aa11.28□□□□□ -0.6
NDC1-202ENST00000480952 LSMEM1Q8N8F7 131 aa11.28□□□□□ -0.6
NDC1-202ENST00000480952 OR4K5Q8NGD3 323 aa11.28□□□□□ -0.6
NDC1-202ENST00000480952 OR6S1Q8NH40 331 aa11.28□□□□□ -0.6
NDC1-202ENST00000480952 TMEM54Q969K7 222 aa11.28□□□□□ -0.6
NDC1-202ENST00000480952 ZDHHC16Q969W1 377 aa11.28□□□□□ -0.6
NDC1-202ENST00000480952 RBM4BQ9BQ04 359 aaKnown RBP11.28□□□□□ -0.6
NDC1-202ENST00000480952 PATZ1Q9HBE1 687 aaKnown RBP11.28□□□□□ -0.6
NDC1-202ENST00000480952 TNFRSF19Q9NS68 423 aa11.28□□□□□ -0.6
NDC1-202ENST00000480952 MRPL39Q9NYK5 338 aaKnown RBP11.28□□□□□ -0.6
NDC1-202ENST00000480952 SELENONQ9NZV5 590 aa11.28□□□□□ -0.6
NDC1-202ENST00000480952 OR5V1Q9UGF6 321 aa11.28□□□□□ -0.6
NDC1-202ENST00000480952 NBEAL2Q6ZNJ1 2754 aa11.27□□□□□ -0.61
NDC1-202ENST00000480952 MDFIC2A0A1B0GVS7 189 aa11.27□□□□□ -0.61
NDC1-202ENST00000480952 C11orf98E9PRG8 122 aa11.27□□□□□ -0.61
NDC1-202ENST00000480952 PLPP3O14495 311 aa11.27□□□□□ -0.61
NDC1-202ENST00000480952 TM9SF1O15321 606 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms