RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 BHLHA15Q7RTS1 189 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-213ENST00000480102 OLIG3Q7RTU3 272 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 NUFIP2Q7Z417 695 aaKnown RBP4.29□□□□□ -1.72
PTCD3-213ENST00000480102 DTX2Q86UW9 622 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 COMTD1Q86VU5 262 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 CARM1Q86X55 608 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 ZNF100Q8IYN0 542 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 CADM2Q8N3J6 435 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 LINC00471Q8N535 108 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 TMEM99Q8N816 258 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 SLC26A7Q8TE54 656 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 IPCEF1Q8WWN9 437 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-213ENST00000480102 ACOT11Q8WXI4 607 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-213ENST00000480102 TAAR8Q969N4 342 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 RCN3Q96D15 328 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 KTI12Q96EK9 354 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-213ENST00000480102 C7orf34Q96L11 122 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 WWC2-AS2Q96NR7 200 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 ZNF347Q96SE7 839 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 CCT8L2Q96SF2 557 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 GPX7Q96SL4 187 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-213ENST00000480102 MCHR1Q99705 422 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 ELAC2Q9BQ52 826 aaKnown RBP4.29□□□□□ -1.72
PTCD3-213ENST00000480102 PRSS27Q9BQR3 290 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 KATNB1Q9BVA0 655 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 POLDIP3Q9BY77 421 aaKnown RBP4.29□□□□□ -1.72
PTCD3-213ENST00000480102 MRPL13Q9BYD1 178 aaKnown RBP4.29□□□□□ -1.72
PTCD3-213ENST00000480102 OR11A1Q9GZK7 315 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 MMADHCQ9H3L0 296 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-213ENST00000480102 C1orf198Q9H425 327 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 NANSQ9NR45 359 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 TUBG2Q9NRH3 451 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 ACTR3BQ9P1U1 418 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 TAGLN3Q9UI15 199 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 PRPF19Q9UMS4 504 aaKnown RBP4.29□□□□□ -1.72
PTCD3-213ENST00000480102 OAZ3Q9UMX2 235 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 A4GNTQ9UNA3 340 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 TMEM5Q9Y2B1 443 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 SLC25A15Q9Y619 301 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 ENPP4Q9Y6X5 453 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 CCDC168Q8NDH2 2452 aa4.29□□□□□ -1.72
PTCD3-213ENST00000480102 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.28□□□□□ -1.72
PTCD3-213ENST00000480102 ARRDC5A6NEK1 342 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 CCT8L1PA6NM43 557 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 FAM171A2A8MVW0 826 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 ZNF587BE7ETH6 402 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 MS4A18H0YCH9 400 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 OVOL3O00110 214 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 HS3ST1O14792 307 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 SLC43A1O75387 559 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 GMNNO75496 209 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 ZNF682O95780 498 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 ADAP00813 363 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 SEMG1P04279 462 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 ITGA5P08648 1049 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 DANCRP0C864 163 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 CD53P19397 219 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 DNASE1P24855 282 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 GTF2E2P29084 291 aaKnown RBP4.28□□□□□ -1.72
PTCD3-213ENST00000480102 GRPRP30550 384 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 ARR3P36575 388 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 PTDSS1P48651 473 aaKnown RBP4.28□□□□□ -1.72
PTCD3-213ENST00000480102 EVX1P49640 407 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 NUDT2P50583 147 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 SCAND1P57086 179 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 PSME3P61289 254 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 GNGT1P63211 74 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 SIRPAP78324 504 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 PRKCDQ05655 676 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 PDCD1Q15116 288 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 PPA1Q15181 289 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 DEFB113Q30KQ7 82 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 MS4A18Q3C1V0 323 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 IFI44LQ53G44 452 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 C10orf128Q5T292 105 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 TSPO2Q5TGU0 170 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 LCN8Q6JVE9 175 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 PGM2L1Q6PCE3 622 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 TTC33Q6PID6 262 aaPredicted RBP4.28□□□□□ -1.72
PTCD3-213ENST00000480102 FOXL2NBQ6ZUU3 175 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 MBOAT2Q6ZWT7 520 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 AAED1Q7RTV5 226 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 SLC46A3Q7Z3Q1 461 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 CYP4Z1Q86W10 505 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 CXorf67Q86X51 503 aaPredicted RBP4.28□□□□□ -1.72
PTCD3-213ENST00000480102 UEVLDQ8IX04 471 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 C20orf196Q8IYI0 205 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 FITM2Q8N6M3 262 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 SMYD1Q8NB12 490 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 CCDC197Q8NCU1 140 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 NUP37Q8NFH4 326 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 LINC01560Q8TB33 94 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 Q8TCH9 128 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 TMEM239Q8WW34 195 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 TMEM54Q969K7 222 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 S100PBPQ96BU1 408 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 NMD3Q96D46 503 aaKnown RBP4.28□□□□□ -1.72
PTCD3-213ENST00000480102 SLC25A44Q96H78 314 aaPredicted RBP4.28□□□□□ -1.72
PTCD3-213ENST00000480102 ZNF385AQ96PM9 386 aaKnown RBP4.28□□□□□ -1.72
PTCD3-213ENST00000480102 OR2M2Q96R28 347 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms