RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 PNPLA2Q96AD5 504 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 RASD2Q96D21 266 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 ERMAPQ96PL5 475 aaPredicted RBP5.93□□□□□ -1.46
USP48-208ENST00000479177 IL4I1Q96RQ9 567 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 KCNJ15Q99712 375 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 TEX12Q9BXU0 123 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 DEFB127Q9H1M4 99 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 FANCFQ9NPI8 374 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 INIPQ9NRY2 104 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 RASSF1Q9NS23 344 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 TVP23BQ9NYZ1 205 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 DNAJC27Q9NZQ0 273 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 B3GAT1Q9P2W7 334 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 SPRR3Q9UBC9 169 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 AASSQ9UDR5 926 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 COA3Q9Y2R0 106 aaPredicted RBP5.93□□□□□ -1.46
USP48-208ENST00000479177 ADAM18Q9Y3Q7 739 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 IER3IP1Q9Y5U9 82 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 POLEQ07864 2286 aa5.93□□□□□ -1.46
USP48-208ENST00000479177 GTF3C1Q12789 2109 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 TRIM64A6NGJ6 449 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 KDM4EB2RXH2 506 aaPredicted RBP5.92□□□□□ -1.46
USP48-208ENST00000479177 MS4A18H0YCH9 400 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 AQP7O14520 342 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 IMPA2O14732 288 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 RNF13O43567 381 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 TRAF3IP2O43734 574 aaPredicted RBP5.92□□□□□ -1.46
USP48-208ENST00000479177 IDH3BO43837 385 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 CXCL13O43927 109 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 EIF1BO60739 113 aaKnown RBP5.92□□□□□ -1.46
USP48-208ENST00000479177 RAMP1O60894 148 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 OR6A2O95222 327 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 TNFAIP8O95379 198 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 IFNGP01579 166 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 LYNP07948 512 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 HLA-DOBP13765 273 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 HIST1H1CP16403 213 aaKnown RBP5.92□□□□□ -1.46
USP48-208ENST00000479177 SDHAP31040 664 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 RAC3P60763 192 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 HSF1Q00613 529 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 POU3F1Q03052 451 aaPredicted RBP5.92□□□□□ -1.46
USP48-208ENST00000479177 CRMP1Q14194 572 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 BCL2A1Q16548 175 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 ACKR1Q16570 336 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 SMN1Q16637 294 aaKnown RBP5.92□□□□□ -1.46
USP48-208ENST00000479177 MS4A18Q3C1V0 323 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 NADK2Q4G0N4 442 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 MESTQ5EB52 335 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 EMC4Q5J8M3 183 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 ZNF362Q5T0B9 420 aaPredicted RBP5.92□□□□□ -1.46
USP48-208ENST00000479177 PDSS1Q5T2R2 415 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 AADACL4Q5VUY2 407 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 GPR139Q6DWJ6 353 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 VASNQ6EMK4 673 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 NHLRC1Q6VVB1 395 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 PTCHD4Q6ZW05 846 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 PXKQ7Z7A4 578 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 ADCK1Q86TW2 530 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 UBQLNLQ8IYU4 475 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 LILRB2Q8N423 598 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 Q8NA96 180 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 SDR9C7Q8NEX9 313 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 CPNE4Q96A23 557 aaPredicted RBP5.92□□□□□ -1.46
USP48-208ENST00000479177 ZHX1-C8orf76Q96EF9 292 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 PLEKHA8Q96JA3 519 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 LRR1Q96L50 414 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 Q96M85 177 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 YTHDF1Q9BYJ9 559 aaKnown RBP5.92□□□□□ -1.46
USP48-208ENST00000479177 TXNIPQ9H3M7 391 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 FN3KQ9H479 309 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 LDAHQ9H6V9 325 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 EXO5Q9H790 373 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 ZNF696Q9H7X3 374 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 HINT3Q9NQE9 182 aaKnown RBP5.92□□□□□ -1.46
USP48-208ENST00000479177 ZNF71Q9NQZ8 489 aaPredicted RBP5.92□□□□□ -1.46
USP48-208ENST00000479177 LUZP4Q9P127 313 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 KLHL21Q9UJP4 597 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 RASD1Q9Y272 281 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 GPR52Q9Y2T5 361 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 NOX1Q9Y5S8 564 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 KMT2BQ9UMN6 2715 aaPredicted RBP5.92□□□□□ -1.46
USP48-208ENST00000479177 COL6A6A6NMZ7 2263 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 CACNA1BQ00975 2339 aa5.92□□□□□ -1.46
USP48-208ENST00000479177 IGHV3-15A0A0B4J1V0 119 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 LOC102725191A0A1B0GVB3 256 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 A0A1W2PRG6 482 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 SH3D21A4FU49 640 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 CCDC182A6NF36 153 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 NPIPA5E9PKD4 350 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 TLX2O43763 284 aaPredicted RBP5.91□□□□□ -1.46
USP48-208ENST00000479177 XPNPEP2O43895 674 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 ENTPD6O75354 484 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 SERPINI2O75830 405 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 WISP2O76076 250 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 PLGP00747 810 aaPredicted RBP5.91□□□□□ -1.46
USP48-208ENST00000479177 CRYABP02511 175 aaKnown RBP5.91□□□□□ -1.46
USP48-208ENST00000479177 RPSAP08865 295 aaKnown RBP5.91□□□□□ -1.46
USP48-208ENST00000479177 CCDC159P0C7I6 412 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 SMIM18P0DKX4 95 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 CPN1P15169 458 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms