RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 SLC7A10Q9NS82 523 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 IMPAD1Q9NX62 359 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 OSGIN2Q9Y236 505 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 NOSIPQ9Y314 301 aaKnown RBP11.58□□□□□ -0.56
CHD3-210ENST00000479080 UGT2A1Q9Y4X1 527 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 ALPK2Q86TB3 2170 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 A0A0G2JNJ9 132 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 FAM171A2A8MVW0 826 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 GPR171O14626 319 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 IGHV3-9P01782 118 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 IGHG1P01857 330 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 HOXD4P09016 255 aaPredicted RBP11.57□□□□□ -0.56
CHD3-210ENST00000479080 ZNF3P17036 446 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 TEKQ02763 1124 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 RBPJQ06330 500 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 C6orf141Q5SZD1 244 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 RIPPLY2Q5TAB7 128 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 NXNL2Q5VZ03 156 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 UGT2A3Q6UWM9 527 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 FAM214BQ7L5A3 538 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 BTLAQ7Z6A9 289 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 ZBTB46Q86UZ6 589 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 SETD9Q8NE22 299 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 OR51L1Q8NGJ5 315 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 HTRA1Q92743 480 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 MCHR2Q969V1 340 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 ZNF566Q969W8 418 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 STARD4Q96DR4 205 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 FOXN4Q96NZ1 517 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 ALKBH3Q96Q83 286 aaPredicted RBP11.57□□□□□ -0.56
CHD3-210ENST00000479080 TM9SF2Q99805 663 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 C12orf49Q9H741 205 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 PAK1IP1Q9NWT1 392 aaPredicted RBP11.57□□□□□ -0.56
CHD3-210ENST00000479080 GLTPQ9NZD2 209 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 EMC3Q9P0I2 261 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 Q9UFV3 132 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 B9D1Q9UPM9 204 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 MEMO1Q9Y316 297 aa11.57□□□□□ -0.56
CHD3-210ENST00000479080 RELNP78509 3460 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 GTF3C1Q12789 2109 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 MED12LQ86YW9 2145 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 DOCK7Q96N67 2140 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 TRGV8A0A0C4DH27 118 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 CENPBD1B2RD01 187 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 B8ZZF3 427 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 PRR23D1E9PI22 279 aaPredicted RBP11.56□□□□□ -0.56
CHD3-210ENST00000479080 XKRYO14609 159 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 XPNPEP2O43895 674 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 IFNGP01579 166 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 PRR23D2P0DMB1 279 aaPredicted RBP11.56□□□□□ -0.56
CHD3-210ENST00000479080 TMIGD3P0DMS9 266 aaPredicted RBP11.56□□□□□ -0.56
CHD3-210ENST00000479080 GAAP10253 952 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 GNLYP22749 145 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 SLC15A1P46059 708 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 OR3A2P47893 321 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 CSNK1A1P48729 337 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 ZNF91Q05481 1191 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 PMPCAQ10713 525 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 APOFQ13790 326 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 C10orf128Q5T292 105 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 FOXL2NBQ6ZUU3 175 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 LIX1LQ8IVB5 337 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 MCEMP1Q8IX19 187 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 OR6K3Q8NGY3 331 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 PLEKHA8Q96JA3 519 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 PRRG3Q9BZD7 231 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 LINC00470Q9BZP3 86 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 OR51V1Q9H2C8 321 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 SLCO5A1Q9H2Y9 848 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 SRA1Q9HD15 236 aaKnown RBP11.56□□□□□ -0.56
CHD3-210ENST00000479080 AMBNQ9NP70 447 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 GLRX2Q9NS18 164 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 LRCH1Q9Y2L9 728 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 FKBP7Q9Y680 259 aa11.56□□□□□ -0.56
CHD3-210ENST00000479080 COL6A6A6NMZ7 2263 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 ZNF726A6NNF4 738 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 E9PLN8 166 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 M0R3G1 203 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 SLC1A7O00341 560 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 PRODHO43272 600 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 AKAP8O43823 692 aaKnown RBP11.55□□□□□ -0.56
CHD3-210ENST00000479080 SLC16A7O60669 478 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 SLC43A1O75387 559 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 MRPL33O75394 65 aaKnown RBP11.55□□□□□ -0.56
CHD3-210ENST00000479080 MPZL1O95297 269 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 RENP00797 406 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 QDPRP09417 244 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 GSTT1P30711 240 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 CLRN1P58418 232 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 ADORA2A-AS1P86434 159 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 MED21Q13503 144 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 GTF2IRD2BQ6EKJ0 949 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 GTF2IRD2Q86UP8 949 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 RELL2Q8NC24 303 aaPredicted RBP11.55□□□□□ -0.56
CHD3-210ENST00000479080 GALNT11Q8NCW6 608 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 NABP1Q96AH0 204 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 ZMYND19Q96E35 227 aaPredicted RBP11.55□□□□□ -0.56
CHD3-210ENST00000479080 VKORC1Q9BQB6 163 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 RACGAP1Q9H0H5 632 aa11.55□□□□□ -0.56
CHD3-210ENST00000479080 OPN3Q9H1Y3 402 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms