RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 MTNR1AP48039 350 aa17.11■□□□□ 0.33
PDLIM1-202ENST00000477757 UCP2P55851 309 aa17.11■□□□□ 0.33
PDLIM1-202ENST00000477757 DSTNP60981 165 aa17.11■□□□□ 0.33
PDLIM1-202ENST00000477757 TBC1D28Q2M2D7 210 aa17.11■□□□□ 0.33
PDLIM1-202ENST00000477757 C17orf107Q6ZR85 190 aa17.11■□□□□ 0.33
PDLIM1-202ENST00000477757 MIER2Q8N344 545 aa17.11■□□□□ 0.33
PDLIM1-202ENST00000477757 ZNF781Q8N8C0 355 aa17.11■□□□□ 0.33
PDLIM1-202ENST00000477757 CPEB3Q8NE35 698 aaKnown RBP17.11■□□□□ 0.33
PDLIM1-202ENST00000477757 OR52E6Q96RD3 313 aa17.11■□□□□ 0.33
PDLIM1-202ENST00000477757 ASPNQ9BXN1 380 aa17.11■□□□□ 0.33
PDLIM1-202ENST00000477757 MS4A7Q9GZW8 240 aaPredicted RBP17.11■□□□□ 0.33
PDLIM1-202ENST00000477757 SLC6A13Q9NSD5 602 aa17.11■□□□□ 0.33
PDLIM1-202ENST00000477757 TESQ9UGI8 421 aaKnown RBP17.11■□□□□ 0.33
PDLIM1-202ENST00000477757 INSIG2Q9Y5U4 225 aa17.11■□□□□ 0.33
PDLIM1-202ENST00000477757 M0QZ24 198 aa17.1■□□□□ 0.33
PDLIM1-202ENST00000477757 SPAG7O75391 227 aa17.1■□□□□ 0.33
PDLIM1-202ENST00000477757 BGLAPP02818 100 aa17.1■□□□□ 0.33
PDLIM1-202ENST00000477757 LBPP18428 481 aa17.1■□□□□ 0.33
PDLIM1-202ENST00000477757 CRATP43155 626 aa17.1■□□□□ 0.33
PDLIM1-202ENST00000477757 NME5P56597 212 aa17.1■□□□□ 0.33
PDLIM1-202ENST00000477757 UFM1P61960 85 aa17.1■□□□□ 0.33
PDLIM1-202ENST00000477757 ALG10BQ5I7T1 473 aa17.1■□□□□ 0.33
PDLIM1-202ENST00000477757 C16orf87Q6PH81 154 aa17.1■□□□□ 0.33
PDLIM1-202ENST00000477757 WDR88Q6ZMY6 472 aa17.1■□□□□ 0.33
PDLIM1-202ENST00000477757 PXKQ7Z7A4 578 aa17.1■□□□□ 0.33
PDLIM1-202ENST00000477757 DPPA2Q7Z7J5 298 aa17.1■□□□□ 0.33
PDLIM1-202ENST00000477757 ICA1LQ8NDH6 482 aa17.1■□□□□ 0.33
PDLIM1-202ENST00000477757 DNAJA4Q8WW22 397 aaPredicted RBP17.1■□□□□ 0.33
PDLIM1-202ENST00000477757 ANP32BQ92688 251 aaKnown RBP17.1■□□□□ 0.33
PDLIM1-202ENST00000477757 CCT8L2Q96SF2 557 aa17.1■□□□□ 0.33
PDLIM1-202ENST00000477757 SH3GL3Q99963 347 aa17.1■□□□□ 0.33
PDLIM1-202ENST00000477757 CITED1Q99966 193 aa17.1■□□□□ 0.33
PDLIM1-202ENST00000477757 TMEM38BQ9NVV0 291 aa17.1■□□□□ 0.33
PDLIM1-202ENST00000477757 MRPL39Q9NYK5 338 aaKnown RBP17.1■□□□□ 0.33
PDLIM1-202ENST00000477757 A8MXK9 166 aa17.09■□□□□ 0.33
PDLIM1-202ENST00000477757 IGHV2-70P01814 119 aa17.09■□□□□ 0.33
PDLIM1-202ENST00000477757 MYZAPP0CAP1 466 aa17.09■□□□□ 0.33
PDLIM1-202ENST00000477757 HTR2AP28223 471 aa17.09■□□□□ 0.33
PDLIM1-202ENST00000477757 IL12AP29459 219 aa17.09■□□□□ 0.33
PDLIM1-202ENST00000477757 PCGF2P35227 344 aa17.09■□□□□ 0.33
PDLIM1-202ENST00000477757 MMP15P51511 669 aa17.09■□□□□ 0.33
PDLIM1-202ENST00000477757 PDCD4Q53EL6 469 aaKnown RBP17.09■□□□□ 0.33
PDLIM1-202ENST00000477757 TMEM53Q6P2H8 277 aa17.09■□□□□ 0.33
PDLIM1-202ENST00000477757 OR1J2Q8NGS2 313 aa17.09■□□□□ 0.33
PDLIM1-202ENST00000477757 TMEM54Q969K7 222 aa17.09■□□□□ 0.33
PDLIM1-202ENST00000477757 EPYCQ99645 322 aa17.09■□□□□ 0.33
PDLIM1-202ENST00000477757 EGLN1Q9GZT9 426 aa17.09■□□□□ 0.33
PDLIM1-202ENST00000477757 NPHS2Q9NP85 383 aa17.09■□□□□ 0.33
PDLIM1-202ENST00000477757 ZSCAN5BA6NJL1 495 aa17.08■□□□□ 0.32
PDLIM1-202ENST00000477757 RFXANKO14593 260 aa17.08■□□□□ 0.32
PDLIM1-202ENST00000477757 SPRY3O43610 288 aa17.08■□□□□ 0.32
PDLIM1-202ENST00000477757 ITM2AO43736 263 aa17.08■□□□□ 0.32
PDLIM1-202ENST00000477757 FARS2O95363 451 aaKnown RBP17.08■□□□□ 0.32
PDLIM1-202ENST00000477757 PTHP01270 115 aa17.08■□□□□ 0.32
PDLIM1-202ENST00000477757 ADH4P08319 380 aa17.08■□□□□ 0.32
PDLIM1-202ENST00000477757 ALDOCP09972 364 aaKnown RBP17.08■□□□□ 0.32
PDLIM1-202ENST00000477757 ZNF362Q5T0B9 420 aaPredicted RBP17.08■□□□□ 0.32
PDLIM1-202ENST00000477757 FAM91A1Q658Y4 838 aa17.08■□□□□ 0.32
PDLIM1-202ENST00000477757 OGFOD2Q6N063 350 aa17.08■□□□□ 0.32
PDLIM1-202ENST00000477757 BRICD5Q6PL45 260 aa17.08■□□□□ 0.32
PDLIM1-202ENST00000477757 RHOUQ7L0Q8 258 aa17.08■□□□□ 0.32
PDLIM1-202ENST00000477757 PARP8Q8N3A8 854 aa17.08■□□□□ 0.32
PDLIM1-202ENST00000477757 SPICQ8N5J4 248 aa17.08■□□□□ 0.32
PDLIM1-202ENST00000477757 OR1J1Q8NGS3 322 aa17.08■□□□□ 0.32
PDLIM1-202ENST00000477757 MOGAT1Q96PD6 335 aa17.08■□□□□ 0.32
PDLIM1-202ENST00000477757 LRMDAQ9H2I8 198 aa17.08■□□□□ 0.32
PDLIM1-202ENST00000477757 BEX1Q9HBH7 125 aa17.08■□□□□ 0.32
PDLIM1-202ENST00000477757 AIG1Q9NVV5 245 aa17.08■□□□□ 0.32
PDLIM1-202ENST00000477757 THUMPD1Q9NXG2 353 aaKnown RBP17.08■□□□□ 0.32
PDLIM1-202ENST00000477757 GLTPQ9NZD2 209 aa17.08■□□□□ 0.32
PDLIM1-202ENST00000477757 NPTNQ9Y639 398 aa17.08■□□□□ 0.32
PDLIM1-202ENST00000477757 PLSCR5A0PG75 271 aa17.07■□□□□ 0.32
PDLIM1-202ENST00000477757 TMEM247A6NEH6 219 aa17.07■□□□□ 0.32
PDLIM1-202ENST00000477757 PLPP3O14495 311 aa17.07■□□□□ 0.32
PDLIM1-202ENST00000477757 TIMM23O14925 209 aa17.07■□□□□ 0.32
PDLIM1-202ENST00000477757 SERPINI2O75830 405 aa17.07■□□□□ 0.32
PDLIM1-202ENST00000477757 IGHV4-38-2P0DP08 117 aa17.07■□□□□ 0.32
PDLIM1-202ENST00000477757 BIDP55957 195 aa17.07■□□□□ 0.32
PDLIM1-202ENST00000477757 SLC36A2Q495M3 483 aa17.07■□□□□ 0.32
PDLIM1-202ENST00000477757 TMEM255AQ5JRV8 349 aa17.07■□□□□ 0.32
PDLIM1-202ENST00000477757 ULK3Q6PHR2 472 aa17.07■□□□□ 0.32
PDLIM1-202ENST00000477757 OR4K5Q8NGD3 323 aa17.07■□□□□ 0.32
PDLIM1-202ENST00000477757 OR4F5Q8NH21 305 aa17.07■□□□□ 0.32
PDLIM1-202ENST00000477757 IPCEF1Q8WWN9 437 aaPredicted RBP17.07■□□□□ 0.32
PDLIM1-202ENST00000477757 RHOXF2Q9BQY4 288 aa17.07■□□□□ 0.32
PDLIM1-202ENST00000477757 RNF121Q9H920 327 aa17.07■□□□□ 0.32
PDLIM1-202ENST00000477757 PATZ1Q9HBE1 687 aaKnown RBP17.07■□□□□ 0.32
PDLIM1-202ENST00000477757 BCL2L10Q9HD36 194 aa17.07■□□□□ 0.32
PDLIM1-202ENST00000477757 GPANK1O95872 356 aa17.06■□□□□ 0.32
PDLIM1-202ENST00000477757 PLATP00750 562 aa17.06■□□□□ 0.32
PDLIM1-202ENST00000477757 PPIAL4GP0DN37 164 aa17.06■□□□□ 0.32
PDLIM1-202ENST00000477757 AHCYP23526 432 aa17.06■□□□□ 0.32
PDLIM1-202ENST00000477757 ETV4P43268 484 aa17.06■□□□□ 0.32
PDLIM1-202ENST00000477757 SLC6A9P48067 706 aa17.06■□□□□ 0.32
PDLIM1-202ENST00000477757 RAG2P55895 527 aa17.06■□□□□ 0.32
PDLIM1-202ENST00000477757 SEC61A1P61619 476 aaKnown RBP17.06■□□□□ 0.32
PDLIM1-202ENST00000477757 TMEM155Q4W5P6 130 aa17.06■□□□□ 0.32
PDLIM1-202ENST00000477757 KLHL36Q8N4N3 616 aa17.06■□□□□ 0.32
PDLIM1-202ENST00000477757 KIR3DL3Q8N743 410 aa17.06■□□□□ 0.32
PDLIM1-202ENST00000477757 RBM15BQ8NDT2 890 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms