RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	LRRC14B	A6NHZ5	514 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520		A6NIZ1	184 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR5H1	A6NKK0	313 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	NCF1C	A8MVU1	366 aa	Predicted RBP	4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	IDS	B3KWA1	339 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520		F5H0A9	414 aa	Predicted RBP	4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520		K7ERQ8	282 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	PRRG1	O14668	218 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	P2RX6	O15547	441 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	FFAR2	O15552	330 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	FLRT2	O43155	660 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	PCDH7	O60245	1069 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	GPRIN2	O60269	458 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	SLC25A12	O75746	678 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	NCR1	O76036	304 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	DFFB	O76075	338 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	LY86	O95711	162 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	FGF19	O95750	216 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	GUCA1C	O95843	209 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	C6orf47	O95873	294 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	MT-ND4	P03905	459 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	WNT1	P04628	370 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	EDN1	P05305	212 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	CHRM4	P08173	479 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	CD14	P08571	375 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	TBC1D3H	P0C7X1	549 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	PET100	P0DJ07	73 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	CXCL8	P10145	99 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	TFPI	P10646	304 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	COX7A2	P14406	83 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	KCNE1	P15382	129 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	AMD1	P17707	334 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	SDC1	P18827	310 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	DRD5	P21918	477 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	DGKA	P23743	735 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	CPT2	P23786	658 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	ACKR3	P25106	362 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	PRDX3	P30048	256 aa	Known RBP	4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	MAP3K8	P41279	467 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	RAD52	P43351	418 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	TNFSF10	P50591	281 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	LUM	P51884	338 aa	Predicted RBP	4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	F2RL1	P55085	397 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	RPS20	P60866	119 aa	Known RBP	4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	ACTC1	P68032	377 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	ACTA1	P68133	377 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	IL13RA1	P78552	427 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	CDK6	Q00534	326 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	HHEX	Q03014	270 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	HGFAC	Q04756	655 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	OLIG2	Q13516	323 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	SCARB2	Q14108	478 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZNF234	Q14588	700 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	GINS1	Q14691	196 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	SMAD1	Q15797	465 aa	Known RBP	4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	SYPL1	Q16563	259 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	ALG11	Q2TAA5	492 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	GFOD2	Q3B7J2	385 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	SLC10A6	Q3KNW5	377 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	SPDYE7P	Q495Y7	208 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	TMEM35A	Q53FP2	167 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZNF789	Q5FWF6	425 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	EOGT	Q5NDL2	527 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	AKR1C8P	Q5T2L2	129 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	MARC1	Q5VT66	337 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	MBNL2	Q5VZF2	373 aa	Known RBP	4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	C1orf94	Q6P1W5	598 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	RPL22L1	Q6P5R6	122 aa	Known RBP	4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	ANKRD16	Q6P6B7	361 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZCCHC12	Q6PEW1	402 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	SMARCD3	Q6STE5	483 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZNF322	Q6U7Q0	402 aa	Predicted RBP	4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	SCIMP	Q6UWF3	145 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	SERPINA13P	Q6UXR4	307 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	APOOL	Q6UXV4	268 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	CEACAM20	Q6UY09	585 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	HEPN1	Q6WQI6	88 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	C16orf59	Q7L2K0	433 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	GPRIN1	Q7Z2K8	1008 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	LRRC70	Q7Z2Q7	622 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	GRASP	Q7Z6J2	395 aa	Predicted RBP	4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	TSEN54	Q7Z6J9	526 aa	Known RBP	4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	ADGRE4P	Q86SQ3	457 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	RTN4RL1	Q86UN2	441 aa	Predicted RBP	4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	PIM3	Q86V86	326 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	MON1A	Q86VX9	555 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	SYT12	Q8IV01	421 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	CDK20	Q8IZL9	346 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	PRSS35	Q8N3Z0	413 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	TEX26	Q8N6G2	289 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	NPW	Q8N729	165 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZNF610	Q8N9Z0	462 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	RELL2	Q8NC24	303 aa	Predicted RBP	4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	LFNG	Q8NES3	379 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR2AP1	Q8NGE2	309 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR10A7	Q8NGE5	316 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR2D3	Q8NGH3	330 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR52N4	Q8NGI2	321 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR5D16	Q8NGK9	328 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR10R2	Q8NGX6	335 aa		4.28	□□□□□ -1.72

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