RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 ERVK-25P63136 954 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 ARF1P84077 181 aaKnown RBP11.52□□□□□ -0.57
TOP3A-205ENST00000477508 PPP1R8Q12972 351 aaKnown RBP11.52□□□□□ -0.57
TOP3A-205ENST00000477508 TOP3AQ13472 1001 aaPredicted RBP11.52□□□□□ -0.57
TOP3A-205ENST00000477508 KPNB1Q14974 876 aaKnown RBP11.52□□□□□ -0.57
TOP3A-205ENST00000477508 NRN1LQ496H8 165 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 BEX5Q5H9J7 111 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 C9orf135Q5VTT2 229 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 FBXW10Q5XX13 1052 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 SHQ1Q6PI26 577 aaKnown RBP11.52□□□□□ -0.57
TOP3A-205ENST00000477508 ZNF620Q6ZNG0 422 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 LINGO2Q7L985 606 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 FAM122BQ7Z309 247 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 ADCK1Q86TW2 530 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 IGFN1Q86VF2 1251 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 WFDC8Q8IUA0 241 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 OR52L1Q8NGH7 329 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 ZNF519Q8TB69 540 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 BCL2L2Q92843 193 aaPredicted RBP11.52□□□□□ -0.57
TOP3A-205ENST00000477508 ZC3HAV1LQ96H79 300 aaKnown RBP11.52□□□□□ -0.57
TOP3A-205ENST00000477508 ZNF570Q96NI8 536 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 FEVQ99581 238 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 OR52D1Q9H346 318 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 SLC17A5Q9NRA2 495 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 PDP1Q9P0J1 537 aaPredicted RBP11.52□□□□□ -0.57
TOP3A-205ENST00000477508 CDH10Q9Y6N8 788 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 ABCA4P78363 2273 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 ARPC4-TTLL3A0A0A6YYG9 625 aa11.51□□□□□ -0.57
TOP3A-205ENST00000477508 DHHO43323 396 aa11.51□□□□□ -0.57
TOP3A-205ENST00000477508 TXNDC12O95881 172 aa11.51□□□□□ -0.57
TOP3A-205ENST00000477508 IST1P53990 364 aa11.51□□□□□ -0.57
TOP3A-205ENST00000477508 CD47Q08722 323 aa11.51□□□□□ -0.57
TOP3A-205ENST00000477508 TBRG1Q3YBR2 411 aa11.51□□□□□ -0.57
TOP3A-205ENST00000477508 PHYHD1Q5SRE7 291 aa11.51□□□□□ -0.57
TOP3A-205ENST00000477508 C10orf128Q5T292 105 aa11.51□□□□□ -0.57
TOP3A-205ENST00000477508 LRFN4Q6PJG9 635 aa11.51□□□□□ -0.57
TOP3A-205ENST00000477508 KLHL17Q6TDP4 642 aa11.51□□□□□ -0.57
TOP3A-205ENST00000477508 THSD4Q6ZMP0 1018 aa11.51□□□□□ -0.57
TOP3A-205ENST00000477508 HIPK1Q86Z02 1210 aa11.51□□□□□ -0.57
TOP3A-205ENST00000477508 SYT14Q8NB59 555 aa11.51□□□□□ -0.57
TOP3A-205ENST00000477508 OR5K1Q8NHB7 308 aa11.51□□□□□ -0.57
TOP3A-205ENST00000477508 HDAC2Q92769 488 aaKnown RBP11.51□□□□□ -0.57
TOP3A-205ENST00000477508 MCHR2Q969V1 340 aa11.51□□□□□ -0.57
TOP3A-205ENST00000477508 GTPBP3Q969Y2 492 aaKnown RBP11.51□□□□□ -0.57
TOP3A-205ENST00000477508 Q96M85 177 aa11.51□□□□□ -0.57
TOP3A-205ENST00000477508 TSPAN32Q96QS1 320 aa11.51□□□□□ -0.57
TOP3A-205ENST00000477508 ESRP2Q9H6T0 727 aaKnown RBP11.51□□□□□ -0.57
TOP3A-205ENST00000477508 NTN4Q9HB63 628 aa11.51□□□□□ -0.57
TOP3A-205ENST00000477508 RASSF1Q9NS23 344 aa11.51□□□□□ -0.57
TOP3A-205ENST00000477508 BAIAP2Q9UQB8 552 aa11.51□□□□□ -0.57
TOP3A-205ENST00000477508 ADAM18Q9Y3Q7 739 aa11.51□□□□□ -0.57
TOP3A-205ENST00000477508 IER3IP1Q9Y5U9 82 aa11.51□□□□□ -0.57
TOP3A-205ENST00000477508 SLC25A15Q9Y619 301 aa11.51□□□□□ -0.57
TOP3A-205ENST00000477508 NBPF19A0A087WUL8 3843 aa11.5□□□□□ -0.57
TOP3A-205ENST00000477508 PRSS37A4D1T9 235 aa11.5□□□□□ -0.57
TOP3A-205ENST00000477508 G3V2T6 193 aa11.5□□□□□ -0.57
TOP3A-205ENST00000477508 ARHGEF9O43307 516 aa11.5□□□□□ -0.57
TOP3A-205ENST00000477508 FARS2O95363 451 aaKnown RBP11.5□□□□□ -0.57
TOP3A-205ENST00000477508 NOS3P29474 1203 aa11.5□□□□□ -0.57
TOP3A-205ENST00000477508 GUCA1AP43080 201 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-205ENST00000477508 FXYD6P3P58550 94 aa11.5□□□□□ -0.57
TOP3A-205ENST00000477508 RUNX1T1Q06455 604 aa11.5□□□□□ -0.57
TOP3A-205ENST00000477508 KRR1Q13601 381 aaKnown RBP11.5□□□□□ -0.57
TOP3A-205ENST00000477508 ZNF813Q6ZN06 617 aa11.5□□□□□ -0.57
TOP3A-205ENST00000477508 C22orf34Q6ZV56 151 aa11.5□□□□□ -0.57
TOP3A-205ENST00000477508 DPPA2Q7Z7J5 298 aa11.5□□□□□ -0.57
TOP3A-205ENST00000477508 ZDHHC13Q8IUH4 622 aa11.5□□□□□ -0.57
TOP3A-205ENST00000477508 WDFY1Q8IWB7 410 aa11.5□□□□□ -0.57
TOP3A-205ENST00000477508 SVOPLQ8N434 492 aa11.5□□□□□ -0.57
TOP3A-205ENST00000477508 FAM169BQ8N8A8 192 aa11.5□□□□□ -0.57
TOP3A-205ENST00000477508 WDR31Q8NA23 367 aa11.5□□□□□ -0.57
TOP3A-205ENST00000477508 ATG16L2Q8NAA4 619 aa11.5□□□□□ -0.57
TOP3A-205ENST00000477508 OR52N5Q8NH56 324 aa11.5□□□□□ -0.57
TOP3A-205ENST00000477508 NANOS1Q8WY41 292 aaKnown RBP11.5□□□□□ -0.57
TOP3A-205ENST00000477508 NMD3Q96D46 503 aaKnown RBP11.5□□□□□ -0.57
TOP3A-205ENST00000477508 CENPNQ96H22 339 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-205ENST00000477508 SAMD8Q96LT4 415 aa11.5□□□□□ -0.57
TOP3A-205ENST00000477508 ERMAPQ96PL5 475 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-205ENST00000477508 SNX18Q96RF0 628 aa11.5□□□□□ -0.57
TOP3A-205ENST00000477508 FOXB1Q99853 325 aa11.5□□□□□ -0.57
TOP3A-205ENST00000477508 IFT27Q9BW83 186 aa11.5□□□□□ -0.57
TOP3A-205ENST00000477508 OSBPL10Q9BXB5 764 aa11.5□□□□□ -0.57
TOP3A-205ENST00000477508 DENND2DQ9H6A0 471 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-205ENST00000477508 CACNA1DQ01668 2161 aa11.5□□□□□ -0.57
TOP3A-205ENST00000477508 DCHS2Q6V1P9 2916 aa11.49□□□□□ -0.57
TOP3A-205ENST00000477508 TEX13CA0A0J9YWL9 993 aa11.49□□□□□ -0.57
TOP3A-205ENST00000477508 SLC22A23A1A5C7 686 aa11.49□□□□□ -0.57
TOP3A-205ENST00000477508 DEFB108AA8MXU0 73 aa11.49□□□□□ -0.57
TOP3A-205ENST00000477508 PPP1R3DO95685 299 aa11.49□□□□□ -0.57
TOP3A-205ENST00000477508 HRGP04196 525 aa11.49□□□□□ -0.57
TOP3A-205ENST00000477508 OR8G3PP0DMU2 310 aa11.49□□□□□ -0.57
TOP3A-205ENST00000477508 NPR2P20594 1047 aa11.49□□□□□ -0.57
TOP3A-205ENST00000477508 PTAFRP25105 342 aa11.49□□□□□ -0.57
TOP3A-205ENST00000477508 C3orf36Q3SXR2 165 aa11.49□□□□□ -0.57
TOP3A-205ENST00000477508 HIKESHIQ53FT3 197 aa11.49□□□□□ -0.57
TOP3A-205ENST00000477508 ALKBH2Q6NS38 261 aa11.49□□□□□ -0.57
TOP3A-205ENST00000477508 TMEM108Q6UXF1 575 aa11.49□□□□□ -0.57
TOP3A-205ENST00000477508 TMEM179BQ7Z7N9 219 aa11.49□□□□□ -0.57
TOP3A-205ENST00000477508 TMEM200AQ86VY9 491 aa11.49□□□□□ -0.57
TOP3A-205ENST00000477508 PYDC1Q8WXC3 89 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms