RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 OR14A16Q8NHC5 309 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 SLC41A2Q96JW4 573 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 ST6GALNAC5Q9BVH7 336 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 POLE3Q9NRF9 147 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 SIT1Q9Y3P8 196 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 ICE1Q9Y2F5 2266 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 SPTAN1Q13813 2472 aaKnown RBP10.05□□□□□ -0.8
COL27A1-204ENST00000477421 IMPA2O14732 288 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 PHYHO14832 338 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 SLC43A1O75387 559 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 ZFAND5O76080 213 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 HTR3BO95264 441 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 EFEMP2O95967 443 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 RBM34P42696 430 aaKnown RBP10.05□□□□□ -0.8
COL27A1-204ENST00000477421 ELP2Q6IA86 826 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 WDR88Q6ZMY6 472 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 THRSPQ92748 146 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 HLA-CQ95604 372 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 PHF7Q9BWX1 381 aaPredicted RBP10.05□□□□□ -0.8
COL27A1-204ENST00000477421 TMEM74BQ9NUR3 256 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 DNAJB12Q9NXW2 375 aaKnown RBP10.05□□□□□ -0.8
COL27A1-204ENST00000477421 PRICKLE3O43900 615 aaPredicted RBP10.05□□□□□ -0.8
COL27A1-204ENST00000477421 RP2O75695 350 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 LDOC1O95751 146 aaPredicted RBP10.05□□□□□ -0.8
COL27A1-204ENST00000477421 POLR2HP52434 150 aaKnown RBP10.05□□□□□ -0.8
COL27A1-204ENST00000477421 ACTBP60709 375 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 ACTG1P63261 375 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 FAM53BQ14153 422 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 IRF3Q14653 427 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 PRTGQ2VWP7 1150 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 KCTD20Q7Z5Y7 419 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 TMEM17Q86X19 198 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 CCDC28AQ8IWP9 274 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 ZNF321PQ8N8H1 164 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 GPBAR1Q8TDU6 330 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 CCDC74AQ96AQ1 378 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 C3orf49Q96BT1 292 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 NUDT9Q9BW91 350 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 ZFPL1O95159 310 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 IL33O95760 270 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 ZNF28P17035 718 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 AMY2BP19961 511 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 SDHAP31040 664 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 EEF1A1P68104 462 aaKnown RBP10.04□□□□□ -0.8
COL27A1-204ENST00000477421 COL19A1Q14993 1142 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 CDK10Q15131 360 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 GRK1Q15835 563 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 ABCA11PQ4W5N1 156 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 FGGYQ96C11 551 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 MIXL1Q9H2W2 232 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 UBE2ZQ9H832 354 aaPredicted RBP10.04□□□□□ -0.8
COL27A1-204ENST00000477421 A0A087WUJ7 227 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 A8MVM7 634 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 CENPBD1B2RD01 187 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 CYR61O00622 381 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 SIGLEC6O43699 453 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 EPXP11678 715 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 NPR2P20594 1047 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 CDK2P24941 298 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 DAP3P51398 398 aaKnown RBP10.04□□□□□ -0.8
COL27A1-204ENST00000477421 ZNF136P52737 540 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 DCAF7P61962 342 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 PUDPQ08623 228 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 MFSD13AQ14CX5 517 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 CD226Q15762 336 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 SWI5Q1ZZU3 235 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 SPIN3Q5JUX0 258 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 UBE2NLQ5JXB2 153 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 ALKAL2Q6UX46 152 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 CD300LDQ6UXZ3 194 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 SLC16A9Q7RTY1 509 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 OR4D9Q8NGE8 314 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 ANKRD9Q96BM1 317 aaPredicted RBP10.04□□□□□ -0.8
COL27A1-204ENST00000477421 VWCEQ96DN2 955 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 DCLRE1CQ96SD1 692 aaKnown RBP10.04□□□□□ -0.8
COL27A1-204ENST00000477421 ABHD1Q96SE0 405 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 MFRPQ9BY79 579 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 GAREM1Q9H706 876 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 TAS2R8Q9NYW2 309 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 MOKQ9UQ07 419 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 CAMK2AQ9UQM7 478 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 RHBDD3Q9Y3P4 386 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 NOX1Q9Y5S8 564 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 PCP4L1A6NKN8 68 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 TMEM212A6NML5 194 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 APOC3P02656 99 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 FGF9P31371 208 aaPredicted RBP10.04□□□□□ -0.8
COL27A1-204ENST00000477421 ZNF79Q15937 498 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 GAB4Q2WGN9 574 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 IL22RA1Q8N6P7 574 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 SELENOIQ9C0D9 397 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 ZNF160Q9HCG1 818 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 KLHL13Q9P2N7 655 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 FBXL2Q9UKC9 423 aa10.04□□□□□ -0.8
COL27A1-204ENST00000477421 SIRT4Q9Y6E7 314 aaPredicted RBP10.04□□□□□ -0.8
COL27A1-204ENST00000477421 MEGF11A6BM72 1044 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 RBMXL2O75526 392 aaKnown RBP10.03□□□□□ -0.8
COL27A1-204ENST00000477421 LCATP04180 440 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 SRFP11831 508 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 FOLR1P15328 257 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms