RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 ZNF546Q86UE3 836 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 ECHDC2Q86YB7 292 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 FAM133AQ8N9E0 248 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 FNDC5Q8NAU1 212 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 MDS2Q8NDY4 140 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 OR51G1Q8NGK1 321 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 OR6X1Q8NH79 312 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 MAGEE2Q8TD90 523 aaPredicted RBP3.16□□□□□ -1.9
PTCD3-211ENST00000476215 ACER1Q8TDN7 264 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 SRSF12Q8WXF0 261 aaKnown RBP3.16□□□□□ -1.9
PTCD3-211ENST00000476215 TMEM246Q9BRR3 403 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 IL26Q9NPH9 171 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 CCL28Q9NRJ3 127 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 ZNF223Q9UK11 482 aaPredicted RBP3.16□□□□□ -1.9
PTCD3-211ENST00000476215 ADAM28Q9UKQ2 775 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 KCNIP3Q9Y2W7 256 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 WSB1Q9Y6I7 421 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 ZNF831Q5JPB2 1677 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 CICQ96RK0 1608 aaPredicted RBP3.15□□□□□ -1.9
PTCD3-211ENST00000476215 KCPQ6ZWJ8 1503 aa3.15□□□□□ -1.9
PTCD3-211ENST00000476215 ERVV-1B6SEH8 477 aa3.15□□□□□ -1.91
PTCD3-211ENST00000476215 CDK16Q00536 496 aa3.15□□□□□ -1.91
PTCD3-211ENST00000476215 GPM6BQ13491 265 aa3.15□□□□□ -1.91
PTCD3-211ENST00000476215 OR5I1Q13606 314 aa3.15□□□□□ -1.91
PTCD3-211ENST00000476215 GPNMBQ14956 572 aa3.15□□□□□ -1.91
PTCD3-211ENST00000476215 CYTH1Q15438 398 aa3.15□□□□□ -1.91
PTCD3-211ENST00000476215 FILIP1LQ4L180 1135 aa3.15□□□□□ -1.91
PTCD3-211ENST00000476215 UTS2BQ765I0 119 aa3.15□□□□□ -1.91
PTCD3-211ENST00000476215 DHDDSQ86SQ9 333 aa3.15□□□□□ -1.91
PTCD3-211ENST00000476215 NBPF5PQ86XG9 351 aaPredicted RBP3.15□□□□□ -1.91
PTCD3-211ENST00000476215 SCFD1Q8WVM8 642 aa3.15□□□□□ -1.91
PTCD3-211ENST00000476215 TMEM158Q8WZ71 300 aa3.15□□□□□ -1.91
PTCD3-211ENST00000476215 C10orf35Q96D05 121 aa3.15□□□□□ -1.91
PTCD3-211ENST00000476215 RNF185Q96GF1 192 aa3.15□□□□□ -1.91
PTCD3-211ENST00000476215 MTMR9Q96QG7 549 aa3.15□□□□□ -1.91
PTCD3-211ENST00000476215 SRMSQ9H3Y6 488 aa3.15□□□□□ -1.91
PTCD3-211ENST00000476215 MYOZ2Q9NPC6 264 aa3.15□□□□□ -1.91
PTCD3-211ENST00000476215 GIN1Q9NXP7 522 aa3.15□□□□□ -1.91
PTCD3-211ENST00000476215 KLK12Q9UKR0 248 aa3.15□□□□□ -1.91
PTCD3-211ENST00000476215 MMP17Q9ULZ9 603 aa3.15□□□□□ -1.91
PTCD3-211ENST00000476215 MRC1P22897 1456 aa3.15□□□□□ -1.91
PTCD3-211ENST00000476215 SCN11AQ9UI33 1791 aa3.15□□□□□ -1.91
PTCD3-211ENST00000476215 CARMIL3Q8ND23 1372 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 C4AP0C0L4 1744 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 IGLV3-16A0A075B6K0 115 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 KIR2DL5BA0A0G2JN68 375 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 KIR2DL5BA0A0G2JPC4 375 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 PCP4L1A6NKN8 68 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 OR5B21A6NL26 309 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 SLC25A27O95847 323 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 TBPP20226 339 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 CCR6P51684 374 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 UBE2HP62256 183 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 IL24Q13007 206 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 PDIA2Q13087 525 aaKnown RBP3.14□□□□□ -1.91
PTCD3-211ENST00000476215 EIF4EBP2Q13542 120 aaPredicted RBP3.14□□□□□ -1.91
PTCD3-211ENST00000476215 KIAA0087Q14695 138 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 PSG5Q15238 335 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 LRRC10Q5BKY1 277 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 C1orf94Q6P1W5 598 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 PLA2G4DQ86XP0 818 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 NUDCD3Q8IVD9 361 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 KIR2DL5AQ8N109 375 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 ZNF786Q8N393 782 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 KIR2DL5BQ8NHK3 375 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 MARCH1Q8TCQ1 289 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 ACOT11Q8WXI4 607 aaPredicted RBP3.14□□□□□ -1.91
PTCD3-211ENST00000476215 CCT7Q99832 543 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 RIOK1Q9BRS2 568 aaKnown RBP3.14□□□□□ -1.91
PTCD3-211ENST00000476215 HDHD3Q9BSH5 251 aaPredicted RBP3.14□□□□□ -1.91
PTCD3-211ENST00000476215 GBA3Q9H227 469 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 CLMPQ9H6B4 373 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 MCCC2Q9HCC0 563 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 GLRX2Q9NS18 164 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 SLC25A37Q9NYZ2 338 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 DEC1Q9P2X7 70 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 CLCF1Q9UBD9 225 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 TRAPPC4Q9Y296 219 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 N4BP2Q86UW6 1770 aaPredicted RBP3.14□□□□□ -1.91
PTCD3-211ENST00000476215 KIF13BQ9NQT8 1826 aa3.14□□□□□ -1.91
PTCD3-211ENST00000476215 COL5A3P25940 1745 aaPredicted RBP3.13□□□□□ -1.91
PTCD3-211ENST00000476215 TJP1Q07157 1748 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 C12orf71A8MTZ7 269 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 C12orf77C9JDV5 145 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 PES1O00541 588 aaKnown RBP3.13□□□□□ -1.91
PTCD3-211ENST00000476215 NBR2O15453 112 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 CLDN9O95484 217 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 PNMA6AP0CW24 399 aaPredicted RBP3.13□□□□□ -1.91
PTCD3-211ENST00000476215 HPGDP15428 266 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 ZNF32P17041 273 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 EIF2S2P20042 333 aaKnown RBP3.13□□□□□ -1.91
PTCD3-211ENST00000476215 PTMSP20962 102 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 SLC26A3P40879 764 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 ARFIP1P53367 373 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 AIF1P55008 147 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 ACVR1Q04771 509 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 LRRC63Q05C16 580 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 CHIT1Q13231 466 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 FRMPD2BQ6IN97 320 aa3.13□□□□□ -1.91
PTCD3-211ENST00000476215 UQCC3Q6UW78 93 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms