RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 OR1D5P58170 312 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 STARD6P59095 220 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 RAP1BP61224 184 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 BTG1P62324 171 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 RPS4XP62701 263 aaKnown RBP5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 RAP1AP62834 184 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 MRPS10P82664 201 aaKnown RBP5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 RASGEF1BQ0VAM2 473 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 SELENBP1Q13228 472 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 CDSNQ15517 529 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 CARTPTQ16568 116 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 NDUFAF6Q330K2 333 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 TBRG1Q3YBR2 411 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 CCDC92Q53HC0 331 aaPredicted RBP5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 UBE2NLQ5JXB2 153 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 NKAIN2Q5VXU1 208 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 FAM205BPQ63HN1 556 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 TIGD3Q6B0B8 471 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 B3GLCTQ6Y288 498 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 TMEM91Q6ZNR0 172 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 HDDC2Q7Z4H3 204 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 PXKQ7Z7A4 578 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 LUZP2Q86TE4 346 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 SFTPA2Q8IWL1 248 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 TOMM5Q8N4H5 51 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 EID2Q8N6I1 236 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 FRMD1Q8N878 549 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 Q8N9G6 341 aaPredicted RBP5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 OR5L2Q8NGL0 311 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 OR5J2Q8NH18 312 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 OR5AK2Q8NH90 309 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 PTPMT1Q8WUK0 201 aaPredicted RBP5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 CAPSLQ8WWF8 208 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 AKAP1Q92667 903 aaKnown RBP eCLIP5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 TRIM63Q969Q1 353 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 PHF21AQ96BD5 680 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 ZNF486Q96H40 463 aaPredicted RBP5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 SLC41A2Q96JW4 573 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 SNX18Q96RF0 628 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 INTS14Q96SY0 518 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 ADOQ96SZ5 270 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 NMNAT3Q96T66 252 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 ZNF649Q9BS31 505 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 THAP7Q9BT49 309 aaPredicted RBP5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 WACQ9BTA9 647 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 HCAR1Q9BXC0 346 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 ACTR6Q9GZN1 396 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 WWTR1Q9GZV5 400 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 NXF5Q9H1B4 397 aaKnown RBP5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 DPAGT1Q9H3H5 408 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 NEK6Q9HC98 313 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 SDHAF3Q9NRP4 125 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 INIPQ9NRY2 104 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 CYSLTR2Q9NS75 346 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 SACM1LQ9NTJ5 587 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 CKLFQ9UBR5 152 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 C19orf25Q9UFG5 118 aaPredicted RBP5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 IKZF2Q9UKS7 526 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 RASD1Q9Y272 281 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 DTX4Q9Y2E6 619 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 ETV7Q9Y603 341 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 PKD1L2Q7Z442 2459 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 NINQ8N4C6 2090 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 A0A1B0GTQ1 180 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 A0A1B0GVT2 93 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 NAP1L6A6NFF2 107 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 TMEM221A6NGB7 291 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 TMEM212A6NML5 194 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 A8MU76 341 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 A8MVM7 634 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 B4DXG7 233 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 ALG1L2C9J202 215 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 INMT-MINDY4F8WBC2 141 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 SELENOFO60613 162 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 FZD7O75084 574 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 ICOSLGO75144 302 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 TPPPO94811 219 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 RAF1P04049 648 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 RAB40ALP0C0E4 278 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 CLUP10909 449 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 ELK1P19419 428 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 S100A1P23297 94 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 CRABP1P29762 137 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 ERP29P30040 261 aaKnown RBP5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 CCKBRP32239 447 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 FAUP35544 74 aaKnown RBP5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 RFX2P48378 723 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 SELENOPP49908 381 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 DAP3P51398 398 aaKnown RBP5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 P2RX1P51575 399 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 MAP2K6P52564 334 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 CAPZA1P52907 286 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 CAV3P56539 151 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 CLDN20P56880 219 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 SCAND1P57086 179 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 SLC26A5P58743 744 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 ZXDAP98168 799 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 E2F1Q01094 437 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 KCNAB1Q14722 419 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms