RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 SIGLEC7Q9Y286 467 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 PLEKHA6Q9Y2H5 1048 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 MYO9AB2RTY4 2548 aa12.03□□□□□ -0.48
USF1-205ENST00000473969 HS3ST1O14792 307 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 PTP4A3O75365 173 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 E2F6O75461 281 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 PLAUP00749 431 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 OR8G3PP0DMU2 310 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 CD79AP11912 226 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 B4GALT1P15291 398 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 SLC6A6P31641 620 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 ARR3P36575 388 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 ARHGDIAP52565 204 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 TUBA1BP68363 451 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 TUBA4AP68366 448 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 RUNX1T1Q06455 604 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 TSPAN31Q12999 210 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 THEM4Q5T1C6 240 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 GPR139Q6DWJ6 353 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 ADAM5Q6NVV9 412 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 C1orf94Q6P1W5 598 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 LRFN4Q6PJG9 635 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 DPY19L2P2Q6ZN68 376 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 TUBA1AQ71U36 451 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 WDFY1Q8IWB7 410 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 HDAC2Q92769 488 aaKnown RBP12.02□□□□□ -0.49
USF1-205ENST00000473969 FBXW5Q969U6 566 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 TSPAN32Q96QS1 320 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 TMEM204Q9BSN7 226 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 MRPL13Q9BYD1 178 aaKnown RBP12.02□□□□□ -0.49
USF1-205ENST00000473969 LIME1Q9H400 295 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 RNF121Q9H920 327 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 U3KQV3 271 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 ABCA12Q86UK0 2595 aa12.02□□□□□ -0.49
USF1-205ENST00000473969 A0A1W2PPR1 153 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 TCRBV3S1A0A5B6 114 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 MGRN1O60291 552 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 UBL3O95164 117 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 RAB36O95755 333 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 CRYAAP02489 173 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 CBR1P16152 277 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 NPR2P20594 1047 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 LOXP28300 417 aaPredicted RBP12.01□□□□□ -0.49
USF1-205ENST00000473969 NOS3P29474 1203 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 SDHAP31040 664 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 NPRL3Q12980 569 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 FHL1Q13642 323 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 HIST3H3Q16695 136 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 MICAQ29983 383 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 GSG1Q2KHT4 349 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 RFX4Q33E94 735 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 ZNF672Q499Z4 452 aaPredicted RBP12.01□□□□□ -0.49
USF1-205ENST00000473969 RPL13AP3Q6NVV1 102 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 PGBD2Q6P3X8 592 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 DPPA2Q7Z7J5 298 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 SLC22A24Q8N4F4 322 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 FAM169BQ8N8A8 192 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 OR9Q2Q8NGE9 314 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 OR52L1Q8NGH7 329 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 GIPC3Q8TF64 312 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 NSMAFQ92636 917 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 PIGTQ969N2 578 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 SLC38A2Q96QD8 506 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 KCNK17Q96T54 332 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 CCL19Q99731 98 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 IFT27Q9BW83 186 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 OR52D1Q9H346 318 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 DENND2DQ9H6A0 471 aaPredicted RBP12.01□□□□□ -0.49
USF1-205ENST00000473969 SMURF2Q9HAU4 748 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 NRIP3Q9NQ35 241 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 CCM2LQ9NUG4 571 aaPredicted RBP12.01□□□□□ -0.49
USF1-205ENST00000473969 CISD1Q9NZ45 108 aaKnown RBP12.01□□□□□ -0.49
USF1-205ENST00000473969 FBXL3Q9UKT7 428 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 ADAM18Q9Y3Q7 739 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 IER3IP1Q9Y5U9 82 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 ATP23Q9Y6H3 246 aa12.01□□□□□ -0.49
USF1-205ENST00000473969 TEX13CA0A0J9YWL9 993 aa12□□□□□ -0.49
USF1-205ENST00000473969 AHCYL1O43865 530 aa12□□□□□ -0.49
USF1-205ENST00000473969 FKBP6O75344 327 aa12□□□□□ -0.49
USF1-205ENST00000473969 SLC2A10O95528 541 aa12□□□□□ -0.49
USF1-205ENST00000473969 HLA-HP01893 362 aa12□□□□□ -0.49
USF1-205ENST00000473969 GSTM3P21266 225 aa12□□□□□ -0.49
USF1-205ENST00000473969 GSSP48637 474 aa12□□□□□ -0.49
USF1-205ENST00000473969 ERFP50548 548 aa12□□□□□ -0.49
USF1-205ENST00000473969 IST1P53990 364 aa12□□□□□ -0.49
USF1-205ENST00000473969 CDH11P55287 796 aa12□□□□□ -0.49
USF1-205ENST00000473969 PIGFQ07326 219 aa12□□□□□ -0.49
USF1-205ENST00000473969 PPP1R8Q12972 351 aaKnown RBP12□□□□□ -0.49
USF1-205ENST00000473969 KRR1Q13601 381 aaKnown RBP12□□□□□ -0.49
USF1-205ENST00000473969 SGCAQ16586 387 aa12□□□□□ -0.49
USF1-205ENST00000473969 C3orf36Q3SXR2 165 aa12□□□□□ -0.49
USF1-205ENST00000473969 NRN1LQ496H8 165 aa12□□□□□ -0.49
USF1-205ENST00000473969 C10orf128Q5T292 105 aa12□□□□□ -0.49
USF1-205ENST00000473969 TMEM53Q6P2H8 277 aa12□□□□□ -0.49
USF1-205ENST00000473969 SEZ6L2Q6UXD5 910 aa12□□□□□ -0.49
USF1-205ENST00000473969 ZNF627Q7L945 461 aa12□□□□□ -0.49
USF1-205ENST00000473969 SLC16A14Q7RTX9 510 aa12□□□□□ -0.49
USF1-205ENST00000473969 MDP1Q86V88 176 aa12□□□□□ -0.49
USF1-205ENST00000473969 JAZF1Q86VZ6 243 aa12□□□□□ -0.49
USF1-205ENST00000473969 ZNF611Q8N823 705 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms