RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 METTL21CQ5VZV1 264 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 GPR139Q6DWJ6 353 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 OR4F3Q6IEY1 312 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 OR52E8Q6IFG1 317 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 SULT1C3Q6IMI6 304 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 NANOGP8Q6NSW7 305 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 IRGCQ6NXR0 463 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 RPUSD3Q6P087 351 aaKnown RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 PRMT9Q6P2P2 845 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 TMEM220Q6QAJ8 160 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 AGTRAPQ6RW13 159 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 TBPL2Q6SJ96 375 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 IGFL2Q6UWQ7 119 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ENPP6Q6UWR7 440 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 TMEM184AQ6ZMB5 413 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 CERS6Q6ZMG9 384 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 GCNT7Q6ZNI0 430 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 Q6ZS52 159 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 OLIG3Q7RTU3 272 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 EFL1Q7Z2Z2 1120 aaKnown RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ARHGAP22Q7Z5H3 698 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 SPATA19Q7Z5L4 167 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ARPINQ7Z6K5 226 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 TMEM179BQ7Z7N9 219 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 COMTD1Q86VU5 262 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 THOC6Q86W42 341 aaKnown RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 SPATA24Q86W54 205 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 RALGPS2Q86X27 583 aaPredicted RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 CARM1Q86X55 608 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 CALHM3Q86XJ0 350 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 TRAPPC5Q8IUR0 188 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 AQP12AQ8IXF9 295 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 OFCC1Q8IZS5 231 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 CLECL1Q8IZS7 167 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 HS3ST5Q8IZT8 346 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 SLC22A18ASQ8N1D0 253 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 CLEC4FQ8N1N0 589 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 TCAIMQ8N3R3 496 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 LIX1Q8N485 282 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 HDDC3Q8N4P3 179 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 C2orf73Q8N5S3 287 aaPredicted RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 LSMEM1Q8N8F7 131 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF557Q8N988 423 aaPredicted RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 AVL9Q8NBF6 648 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 POGLUT1Q8NBL1 392 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ICA1LQ8NDH6 482 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF740Q8NDX6 193 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 TSPAN14Q8NG11 270 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 OR7A2PQ8NGA2 310 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 OR5AR1Q8NGP9 310 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 OR10Q1Q8NGQ4 319 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 OR2T34Q8NGX1 318 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 OR2T3Q8NH03 318 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 RPLP0P6Q8NHW5 317 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 FLVCR1-AS1Q8TAF5 88 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 PNPT1Q8TCS8 783 aaKnown RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 SLC26A7Q8TE54 656 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 CANT1Q8WVQ1 401 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 SSMEM1Q8WWF3 244 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 SLC5A11Q8WWX8 675 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 SELENOMQ8WWX9 145 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 PATE1Q8WXA2 126 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 OR8D1Q8WZ84 308 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 OR1E3Q8WZA6 343 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 NSMAFQ92636 917 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 GTF2H4Q92759 462 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 STMN2Q93045 179 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 UCN3Q969E3 161 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 NEIL2Q969S2 332 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 SLAMF9Q96A28 289 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 CIDECQ96AQ7 238 aaPredicted RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ELSPBP1Q96BH3 223 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ROPN1LQ96C74 230 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 LRRC58Q96CX6 371 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 OTUB2Q96DC9 234 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 WDR34Q96EX3 536 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 MED8Q96G25 268 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 DUS3LQ96G46 650 aaKnown RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 C4orf45Q96LM5 186 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 C2orf48Q96LS8 159 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 PPP3R2Q96LZ3 170 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 SFXN2Q96NB2 322 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 CCDC115Q96NT0 180 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ANKRD27Q96NW4 1050 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 TSSK3Q96PN8 268 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 MBOAT4Q96T53 435 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 CGREF1Q99674 301 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 SLC29A1Q99808 456 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 GABRG3Q99928 467 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 KCTD14Q9BQ13 255 aaPredicted RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ECSITQ9BQ95 431 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 CCDC3Q9BQI4 270 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 SLC25A23Q9BV35 468 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 NTMT1Q9BV86 223 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 RSPO3Q9BXY4 272 aaPredicted RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 MS4A8Q9BY19 250 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 GABARAPL1Q9H0R8 117 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ATG10Q9H0Y0 220 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ABCG4Q9H172 646 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 RSPH9Q9H1X1 276 aaPredicted RBP1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms