RNA–Protein interactions for RNA: ENST00000473835.6

U2SURP-208, Transcript of U2 snRNP associated SURP domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene U2SURP, Length 7,276 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-208ENST00000473835 OR1F1O43749 312 aa4.27□□□□□ -1.73
U2SURP-208ENST00000473835 DNAJB6O75190 326 aa4.27□□□□□ -1.73
U2SURP-208ENST00000473835 CD1CP29017 333 aa4.27□□□□□ -1.73
U2SURP-208ENST00000473835 MAS1LP35410 378 aa4.27□□□□□ -1.73
U2SURP-208ENST00000473835 SSBP1Q04837 148 aaKnown RBP4.27□□□□□ -1.73
U2SURP-208ENST00000473835 TMEM244Q5VVB8 128 aa4.27□□□□□ -1.73
U2SURP-208ENST00000473835 ENPP7Q6UWV6 458 aa4.27□□□□□ -1.73
U2SURP-208ENST00000473835 UNQ6494/PRO21346Q6UXR6 183 aa4.27□□□□□ -1.73
U2SURP-208ENST00000473835 SLC39A5Q6ZMH5 540 aa4.27□□□□□ -1.73
U2SURP-208ENST00000473835 SLC35F3Q8IY50 421 aa4.27□□□□□ -1.73
U2SURP-208ENST00000473835 OR51D1Q8NGF3 324 aa4.27□□□□□ -1.73
U2SURP-208ENST00000473835 OR52E2Q8NGJ4 325 aa4.27□□□□□ -1.73
U2SURP-208ENST00000473835 ADAMTS17Q8TE56 1095 aa4.27□□□□□ -1.73
U2SURP-208ENST00000473835 SLC39A7Q92504 469 aa4.27□□□□□ -1.73
U2SURP-208ENST00000473835 MALSU1Q96EH3 234 aa4.27□□□□□ -1.73
U2SURP-208ENST00000473835 NKX3-1Q99801 234 aaPredicted RBP4.27□□□□□ -1.73
U2SURP-208ENST00000473835 SLC6A7Q99884 636 aa4.27□□□□□ -1.73
U2SURP-208ENST00000473835 PDCD10Q9BUL8 212 aa4.27□□□□□ -1.73
U2SURP-208ENST00000473835 GGACTQ9BVM4 153 aa4.27□□□□□ -1.73
U2SURP-208ENST00000473835 TEX101Q9BY14 249 aa4.27□□□□□ -1.73
U2SURP-208ENST00000473835 CALML5Q9NZT1 146 aa4.27□□□□□ -1.73
U2SURP-208ENST00000473835 APOBEC3BQ9UH17 382 aaKnown RBP4.27□□□□□ -1.73
U2SURP-208ENST00000473835 CCL26Q9Y258 94 aa4.27□□□□□ -1.73
U2SURP-208ENST00000473835 RPH3AQ9Y2J0 694 aaPredicted RBP4.27□□□□□ -1.73
U2SURP-208ENST00000473835 EML5Q05BV3 1969 aa4.27□□□□□ -1.73
U2SURP-208ENST00000473835 NPIPA5A0A0B4J1W7 369 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 A0A1B0GW55 424 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 NPIPA7E9PJI5 369 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 LDLRAD4O15165 306 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 PRICKLE3O43900 615 aaPredicted RBP4.26□□□□□ -1.73
U2SURP-208ENST00000473835 DUX4L2P0CJ85 424 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 DUX4L3P0CJ86 424 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 DUX4L4P0CJ87 422 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 DUX4L5P0CJ88 424 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 DUX4L6P0CJ89 424 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 DUX4L7P0CJ90 424 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 NPIPA8P0DM63 369 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 GTF2F2P13984 249 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 PGAM2P15259 253 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 LPAR6P43657 344 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 PPICP45877 212 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 POLR2LP62875 67 aaKnown RBP4.26□□□□□ -1.73
U2SURP-208ENST00000473835 SLC7A9P82251 487 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 RAB33AQ14088 237 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 RBM39Q14498 530 aaKnown RBP4.26□□□□□ -1.73
U2SURP-208ENST00000473835 MLF2Q15773 248 aaPredicted RBP4.26□□□□□ -1.73
U2SURP-208ENST00000473835 RAB12Q6IQ22 244 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 DHRS11Q6UWP2 260 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 NDUFAF7Q7L592 441 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 OR8S1Q8NH09 359 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 C15orf40Q8WUR7 153 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 MITD1Q8WV92 249 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 CNTNAP3BQ96NU0 1288 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 NMNAT3Q96T66 252 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 TMEM138Q9NPI0 162 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 DUX4Q9UBX2 424 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 PLEKHA6Q9Y2H5 1048 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 LRRC72A6NJI9 287 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 OR4C45A6NMZ5 311 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 FGF19O95750 216 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 BMP7P18075 431 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 GRPRP30550 384 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 CENPAP49450 140 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 CSNK1EP49674 416 aaKnown RBP4.26□□□□□ -1.73
U2SURP-208ENST00000473835 SSTP61278 116 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 RPS4XP62701 263 aaKnown RBP4.26□□□□□ -1.73
U2SURP-208ENST00000473835 ELAVL2Q12926 359 aaKnown RBP4.26□□□□□ -1.73
U2SURP-208ENST00000473835 ARHGAP19Q14CB8 494 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 LRRC37A5PQ49AS3 106 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 PYY3Q5JQD4 70 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 ARHGAP11AQ6P4F7 1023 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.26□□□□□ -1.73
U2SURP-208ENST00000473835 ANGPTL5Q86XS5 388 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 ARRDC1Q8N5I2 433 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 TMEM229BQ8NBD8 167 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 NUBPLQ8TB37 319 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 C14orf144Q96I85 54 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 CST11Q9H112 138 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 DUSP15Q9H1R2 295 aaPredicted RBP4.26□□□□□ -1.73
U2SURP-208ENST00000473835 TAS2R8Q9NYW2 309 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 LPAR3Q9UBY5 353 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 CXCL10P02778 98 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 RNF224P0DH78 156 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 ACAA2P42765 397 aaKnown RBP4.26□□□□□ -1.73
U2SURP-208ENST00000473835 KIR3DL2P43630 455 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 PPP1R1AQ13522 171 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 TAF13Q15543 124 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 MOGAT2Q3SYC2 334 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 ZNF574Q6ZN55 896 aaPredicted RBP4.26□□□□□ -1.73
U2SURP-208ENST00000473835 SLC25A42Q86VD7 318 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 TRAPPC5Q8IUR0 188 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 DCUN1D3Q8IWE4 304 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 NRSN1Q8IZ57 195 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 SNX33Q8WV41 574 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 TMED6Q8WW62 240 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 PAWRQ96IZ0 340 aaKnown RBP4.26□□□□□ -1.73
U2SURP-208ENST00000473835 RHOFQ9HBH0 211 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 CXXC1Q9P0U4 656 aaPredicted RBP4.26□□□□□ -1.73
U2SURP-208ENST00000473835 GPR34Q9UPC5 381 aa4.26□□□□□ -1.73
U2SURP-208ENST00000473835 UNC80Q8N2C7 3258 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms