RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 BEX5Q5H9J7 111 aa18.22■□□□□ 0.51
TOP3A-204ENST00000472959 THEM4Q5T1C6 240 aa18.22■□□□□ 0.51
TOP3A-204ENST00000472959 ZFP1Q6P2D0 407 aa18.22■□□□□ 0.51
TOP3A-204ENST00000472959 SHQ1Q6PI26 577 aaKnown RBP18.22■□□□□ 0.51
TOP3A-204ENST00000472959 TMEM179BQ7Z7N9 219 aa18.22■□□□□ 0.51
TOP3A-204ENST00000472959 CCDC36Q8IYA8 594 aa18.22■□□□□ 0.51
TOP3A-204ENST00000472959 CLDN22Q8N7P3 220 aa18.22■□□□□ 0.51
TOP3A-204ENST00000472959 WDR31Q8NA23 367 aa18.22■□□□□ 0.51
TOP3A-204ENST00000472959 OR52N5Q8NH56 324 aa18.22■□□□□ 0.51
TOP3A-204ENST00000472959 MCHR2Q969V1 340 aa18.22■□□□□ 0.51
TOP3A-204ENST00000472959 GTPBP3Q969Y2 492 aaKnown RBP18.22■□□□□ 0.51
TOP3A-204ENST00000472959 NMD3Q96D46 503 aaKnown RBP18.22■□□□□ 0.51
TOP3A-204ENST00000472959 Q96M85 177 aa18.22■□□□□ 0.51
TOP3A-204ENST00000472959 ZNF570Q96NI8 536 aa18.22■□□□□ 0.51
TOP3A-204ENST00000472959 RBP7Q96R05 134 aa18.22■□□□□ 0.51
TOP3A-204ENST00000472959 FEVQ99581 238 aa18.22■□□□□ 0.51
TOP3A-204ENST00000472959 IL20Q9NYY1 176 aa18.22■□□□□ 0.51
TOP3A-204ENST00000472959 IL20RAQ9UHF4 553 aa18.22■□□□□ 0.51
TOP3A-204ENST00000472959 MAGED1Q9Y5V3 778 aaPredicted RBP18.22■□□□□ 0.51
TOP3A-204ENST00000472959 IMPA2O14732 288 aa18.21■□□□□ 0.51
TOP3A-204ENST00000472959 ARPC3O15145 178 aa18.21■□□□□ 0.51
TOP3A-204ENST00000472959 DHHO43323 396 aa18.21■□□□□ 0.51
TOP3A-204ENST00000472959 IDH3BO43837 385 aa18.21■□□□□ 0.51
TOP3A-204ENST00000472959 ENTPD5O75356 428 aa18.21■□□□□ 0.51
TOP3A-204ENST00000472959 TXNDC12O95881 172 aa18.21■□□□□ 0.51
TOP3A-204ENST00000472959 WNT11O96014 354 aa18.21■□□□□ 0.51
TOP3A-204ENST00000472959 NR1H2P55055 460 aa18.21■□□□□ 0.51
TOP3A-204ENST00000472959 HIKESHIQ53FT3 197 aa18.21■□□□□ 0.51
TOP3A-204ENST00000472959 ALKBH2Q6NS38 261 aa18.21■□□□□ 0.51
TOP3A-204ENST00000472959 OR52L1Q8NGH7 329 aa18.21■□□□□ 0.51
TOP3A-204ENST00000472959 SAMD8Q96LT4 415 aa18.21■□□□□ 0.51
TOP3A-204ENST00000472959 DENND2DQ9H6A0 471 aaPredicted RBP18.21■□□□□ 0.51
TOP3A-204ENST00000472959 MOV10Q9HCE1 1003 aaKnown RBP18.21■□□□□ 0.51
TOP3A-204ENST00000472959 IER3IP1Q9Y5U9 82 aa18.21■□□□□ 0.51
TOP3A-204ENST00000472959 A0A096LPE4 126 aa18.2■□□□□ 0.5
TOP3A-204ENST00000472959 ARPC4-TTLL3A0A0A6YYG9 625 aa18.2■□□□□ 0.5
TOP3A-204ENST00000472959 A0A1W2PPZ6 126 aa18.2■□□□□ 0.5
TOP3A-204ENST00000472959 ARHGEF9O43307 516 aa18.2■□□□□ 0.5
TOP3A-204ENST00000472959 HRGP04196 525 aa18.2■□□□□ 0.5
TOP3A-204ENST00000472959 ANXA8P13928 327 aa18.2■□□□□ 0.5
TOP3A-204ENST00000472959 ZNF84P51523 738 aa18.2■□□□□ 0.5
TOP3A-204ENST00000472959 UBE2NP61088 152 aaKnown RBP18.2■□□□□ 0.5
TOP3A-204ENST00000472959 CD47Q08722 323 aa18.2■□□□□ 0.5
TOP3A-204ENST00000472959 C10orf128Q5T292 105 aa18.2■□□□□ 0.5
TOP3A-204ENST00000472959 FBXW10Q5XX13 1052 aa18.2■□□□□ 0.5
TOP3A-204ENST00000472959 SEZ6L2Q6UXD5 910 aa18.2■□□□□ 0.5
TOP3A-204ENST00000472959 ADCK1Q86TW2 530 aa18.2■□□□□ 0.5
TOP3A-204ENST00000472959 ERMAPQ96PL5 475 aaPredicted RBP18.2■□□□□ 0.5
TOP3A-204ENST00000472959 FOXB1Q99853 325 aa18.2■□□□□ 0.5
TOP3A-204ENST00000472959 IFT27Q9BW83 186 aa18.2■□□□□ 0.5
TOP3A-204ENST00000472959 ZNF556Q9HAH1 456 aa18.2■□□□□ 0.5
TOP3A-204ENST00000472959 TEX13CA0A0J9YWL9 993 aa18.19■□□□□ 0.5
TOP3A-204ENST00000472959 PRSS37A4D1T9 235 aa18.19■□□□□ 0.5
TOP3A-204ENST00000472959 SIAH2O43255 324 aa18.19■□□□□ 0.5
TOP3A-204ENST00000472959 MGRN1O60291 552 aa18.19■□□□□ 0.5
TOP3A-204ENST00000472959 PPP1R3DO95685 299 aa18.19■□□□□ 0.5
TOP3A-204ENST00000472959 KRR1Q13601 381 aaKnown RBP18.19■□□□□ 0.5
TOP3A-204ENST00000472959 NRN1LQ496H8 165 aa18.19■□□□□ 0.5
TOP3A-204ENST00000472959 MESTQ5EB52 335 aa18.19■□□□□ 0.5
TOP3A-204ENST00000472959 KLHL17Q6TDP4 642 aa18.19■□□□□ 0.5
TOP3A-204ENST00000472959 ZNF813Q6ZN06 617 aa18.19■□□□□ 0.5
TOP3A-204ENST00000472959 TMEM200AQ86VY9 491 aa18.19■□□□□ 0.5
TOP3A-204ENST00000472959 OR5K1Q8NHB7 308 aa18.19■□□□□ 0.5
TOP3A-204ENST00000472959 PYDC1Q8WXC3 89 aa18.19■□□□□ 0.5
TOP3A-204ENST00000472959 NIPSNAP1Q9BPW8 284 aa18.19■□□□□ 0.5
TOP3A-204ENST00000472959 CLEC4MQ9H2X3 399 aaPredicted RBP18.19■□□□□ 0.5
TOP3A-204ENST00000472959 NELFAQ9H3P2 528 aa18.19■□□□□ 0.5
TOP3A-204ENST00000472959 ESRP2Q9H6T0 727 aaKnown RBP18.19■□□□□ 0.5
TOP3A-204ENST00000472959 EGLN3Q9H6Z9 239 aa18.19■□□□□ 0.5
TOP3A-204ENST00000472959 TMEM38BQ9NVV0 291 aa18.19■□□□□ 0.5
TOP3A-204ENST00000472959 CENPEQ02224 2701 aa18.18■□□□□ 0.5
TOP3A-204ENST00000472959 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.18■□□□□ 0.5
TOP3A-204ENST00000472959 A0A1W2PR80 420 aa18.18■□□□□ 0.5
TOP3A-204ENST00000472959 SLC22A23A1A5C7 686 aa18.18■□□□□ 0.5
TOP3A-204ENST00000472959 MYBPC1Q00872 1141 aa18.18■□□□□ 0.5
TOP3A-204ENST00000472959 SLC25A47Q6Q0C1 308 aa18.18■□□□□ 0.5
TOP3A-204ENST00000472959 HIPK1Q86Z02 1210 aa18.18■□□□□ 0.5
TOP3A-204ENST00000472959 HS3ST5Q8IZT8 346 aa18.18■□□□□ 0.5
TOP3A-204ENST00000472959 FAM169BQ8N8A8 192 aa18.18■□□□□ 0.5
TOP3A-204ENST00000472959 DNAJC9Q8WXX5 260 aa18.18■□□□□ 0.5
TOP3A-204ENST00000472959 LRTOMTQ8WZ04 291 aa18.18■□□□□ 0.5
TOP3A-204ENST00000472959 RASD2Q96D21 266 aa18.18■□□□□ 0.5
TOP3A-204ENST00000472959 PIK3IP1Q96FE7 263 aa18.18■□□□□ 0.5
TOP3A-204ENST00000472959 PLPPR2Q96GM1 343 aa18.18■□□□□ 0.5
TOP3A-204ENST00000472959 CENPNQ96H22 339 aaPredicted RBP18.18■□□□□ 0.5
TOP3A-204ENST00000472959 BAIAP2Q9UQB8 552 aa18.18■□□□□ 0.5
TOP3A-204ENST00000472959 G3V2T6 193 aa18.17■□□□□ 0.5
TOP3A-204ENST00000472959 SOCS2O14508 198 aa18.17■□□□□ 0.5
TOP3A-204ENST00000472959 OR8G3PP0DMU2 310 aa18.17■□□□□ 0.5
TOP3A-204ENST00000472959 B4GALT1P15291 398 aa18.17■□□□□ 0.5
TOP3A-204ENST00000472959 PRKACGP22612 351 aa18.17■□□□□ 0.5
TOP3A-204ENST00000472959 NOS3P29474 1203 aa18.17■□□□□ 0.5
TOP3A-204ENST00000472959 CLEC12AQ5QGZ9 265 aa18.17■□□□□ 0.5
TOP3A-204ENST00000472959 NCMAPQ5T1S8 102 aa18.17■□□□□ 0.5
TOP3A-204ENST00000472959 AMIGO2Q86SJ2 522 aa18.17■□□□□ 0.5
TOP3A-204ENST00000472959 ZDHHC13Q8IUH4 622 aa18.17■□□□□ 0.5
TOP3A-204ENST00000472959 SVOPLQ8N434 492 aa18.17■□□□□ 0.5
TOP3A-204ENST00000472959 ATG16L2Q8NAA4 619 aa18.17■□□□□ 0.5
TOP3A-204ENST00000472959 SNX18Q96RF0 628 aa18.17■□□□□ 0.5
TOP3A-204ENST00000472959 TBC1D23Q9NUY8 699 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms