RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 PGA4P0DJD7 388 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 PGA3P0DJD8 388 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 PPIBP23284 216 aaKnown RBP6.92□□□□□ -1.3
USP48-207ENST00000471752 GZMKP49863 264 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 ZP4Q12836 540 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 FHL1Q13642 323 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 HIST3H3Q16695 136 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 VMACQ2NL98 169 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 TRMT5Q32P41 509 aaKnown RBP6.92□□□□□ -1.3
USP48-207ENST00000471752 FAM166AQ6J272 317 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 ZNF613Q6PF04 617 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 DEF8Q6ZN54 512 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 C1orf229Q6ZS94 237 aaPredicted RBP6.92□□□□□ -1.3
USP48-207ENST00000471752 ZNF771Q7L3S4 317 aaPredicted RBP6.92□□□□□ -1.3
USP48-207ENST00000471752 TSEN54Q7Z6J9 526 aaKnown RBP6.92□□□□□ -1.3
USP48-207ENST00000471752 ZNF786Q8N393 782 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 LRRC18Q8N456 261 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 SLC22A24Q8N4F4 322 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 SCAIQ8N9R8 606 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 OR4K5Q8NGD3 323 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 OR6X1Q8NH79 312 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 UBASH3BQ8TF42 649 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 MCHR2Q969V1 340 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 NMD3Q96D46 503 aaKnown RBP6.92□□□□□ -1.3
USP48-207ENST00000471752 SPATA5L1Q9BVQ7 753 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 C19orf24Q9BVV8 132 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 MRPL13Q9BYD1 178 aaKnown RBP6.92□□□□□ -1.3
USP48-207ENST00000471752 RAB1BQ9H0U4 201 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 CACYBPQ9HB71 228 aaKnown RBP6.92□□□□□ -1.3
USP48-207ENST00000471752 TMEM38BQ9NVV0 291 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 ZNF446Q9NWS9 450 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 TMEM160Q9NX00 188 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 RHCGQ9UBD6 479 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 REV1Q9UBZ9 1251 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 DUSP13Q9UII6 198 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 CDC42EP3Q9UKI2 254 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 ANGPT4Q9Y264 503 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 SH3GLB1Q9Y371 365 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 CMAHPQ9Y471 501 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 UGT2A1Q9Y4X1 527 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 CORINQ9Y5Q5 1042 aa6.92□□□□□ -1.3
USP48-207ENST00000471752 LOC100509620A0A075B734 347 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 TRAPPC13A5PLN9 417 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 J3KTA2 159 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 NDUFS8O00217 210 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 FFAR1O14842 300 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 ANGPT2O15123 496 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 MGRN1O60291 552 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 CDC14BO60729 498 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 FMO6PO60774 539 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 TRMUO75648 421 aaKnown RBP6.91□□□□□ -1.3
USP48-207ENST00000471752 PDE5AO76074 875 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 SERPINA5P05154 406 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 C8BP07358 591 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 MMP7P09237 267 aaPredicted RBP6.91□□□□□ -1.3
USP48-207ENST00000471752 TACSTD2P09758 323 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 BMP4P12644 408 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 H2AFXP16104 143 aaPredicted RBP6.91□□□□□ -1.3
USP48-207ENST00000471752 ZNF26P17031 533 aaPredicted RBP6.91□□□□□ -1.3
USP48-207ENST00000471752 SRD5A1P18405 259 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 MAKP20794 623 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 APEX1P27695 318 aaKnown RBP6.91□□□□□ -1.3
USP48-207ENST00000471752 PCGF2P35227 344 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 GLRXP35754 106 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 WNT5AP41221 380 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 NCALDP61601 193 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 LMO4P61968 165 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 GLO1Q04760 184 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 RPL18Q07020 188 aaKnown RBP6.91□□□□□ -1.3
USP48-207ENST00000471752 RBBP4Q09028 425 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 KLF10Q13118 480 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 SPATA46Q5T0L3 261 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 AVPI1Q5T686 147 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 TTC33Q6PID6 262 aaPredicted RBP6.91□□□□□ -1.3
USP48-207ENST00000471752 TBPL2Q6SJ96 375 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 CCDC80Q76M96 950 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 IGFN1Q86VF2 1251 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 RANBP3LQ86VV4 465 aaPredicted RBP6.91□□□□□ -1.3
USP48-207ENST00000471752 MICU2Q8IYU8 434 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 POU5F2Q8N7G0 328 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 BHLHE22Q8NFJ8 381 aaPredicted RBP6.91□□□□□ -1.3
USP48-207ENST00000471752 CLDND2Q8NHS1 167 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 C10orf82Q8WW14 230 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 TMEM158Q8WZ71 300 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 HDAC2Q92769 488 aaKnown RBP6.91□□□□□ -1.3
USP48-207ENST00000471752 LRRC58Q96CX6 371 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 EPYCQ99645 322 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 RACGAP1Q9H0H5 632 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 POFUT1Q9H488 388 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 DYNLRB1Q9NP97 96 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 SAR1AQ9NR31 198 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 NANSQ9NR45 359 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 FGFR1OP2Q9NVK5 253 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 CMTM6Q9NX76 183 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 DCAF16Q9NXF7 216 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 SELENONQ9NZV5 590 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 ARMCX1Q9P291 453 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 RIMS3Q9UJD0 308 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 SLC13A4Q9UKG4 626 aa6.91□□□□□ -1.3
USP48-207ENST00000471752 KCNS2Q9ULS6 477 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms