RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 ACTR3P61158 418 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 ERVK-25P63136 954 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 COX10Q12887 443 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 RFX4Q33E94 735 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 NRN1LQ496H8 165 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 PHYHD1Q5SRE7 291 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 THEM4Q5T1C6 240 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 KLHL17Q6TDP4 642 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 ZNF620Q6ZNG0 422 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 RASSF6Q6ZTQ3 369 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 FAM122BQ7Z309 247 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 CLDN22Q8N7P3 220 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 OR52L1Q8NGH7 329 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 OR52N5Q8NH56 324 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 ZNF519Q8TB69 540 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 NRBF2Q96F24 287 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 ZNF570Q96NI8 536 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 TSPAN32Q96QS1 320 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 KCNK17Q96T54 332 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 FOXB1Q99853 325 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 BDH2Q9BUT1 245 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 CLEC4MQ9H2X3 399 aaPredicted RBP13.25□□□□□ -0.29
SNX13-205ENST00000471744 CDH10Q9Y6N8 788 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 CRYBG3Q68DQ2 2970 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.24□□□□□ -0.29
SNX13-205ENST00000471744 IMPA2O14732 288 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 ARPC3O15145 178 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 IDH3BO43837 385 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 TIPRLO75663 272 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 TXNDC12O95881 172 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 GASTP01350 101 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 QDPRP09417 244 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 ZNF26P17031 533 aaPredicted RBP13.24□□□□□ -0.29
SNX13-205ENST00000471744 FASP25445 335 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 FXYD6P3P58550 94 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 RUNX1T1Q06455 604 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 CD47Q08722 323 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 PPP1R8Q12972 351 aaKnown RBP13.24□□□□□ -0.29
SNX13-205ENST00000471744 ATP6AP1Q15904 470 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 C10orf128Q5T292 105 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 ZFP1Q6P2D0 407 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 LRFN4Q6PJG9 635 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 CD300LDQ6UXZ3 194 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 ZNF813Q6ZN06 617 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 ADCK1Q86TW2 530 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 WDFY1Q8IWB7 410 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 WDR31Q8NA23 367 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 SYT14Q8NB59 555 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 NANOS1Q8WY41 292 aaKnown RBP13.24□□□□□ -0.29
SNX13-205ENST00000471744 HDAC2Q92769 488 aaKnown RBP13.24□□□□□ -0.29
SNX13-205ENST00000471744 MCHR2Q969V1 340 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 PIK3IP1Q96FE7 263 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 ZNF556Q9HAH1 456 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 IL20Q9NYY1 176 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 PDP1Q9P0J1 537 aaPredicted RBP13.24□□□□□ -0.29
SNX13-205ENST00000471744 EDARQ9UNE0 448 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 ADAM18Q9Y3Q7 739 aa13.24□□□□□ -0.29
SNX13-205ENST00000471744 ITPR2Q14571 2701 aa13.23□□□□□ -0.29
SNX13-205ENST00000471744 ARHGEF9O43307 516 aa13.23□□□□□ -0.29
SNX13-205ENST00000471744 FARS2O95363 451 aaKnown RBP13.23□□□□□ -0.29
SNX13-205ENST00000471744 ANXA8P13928 327 aa13.23□□□□□ -0.29
SNX13-205ENST00000471744 PTAFRP25105 342 aa13.23□□□□□ -0.29
SNX13-205ENST00000471744 KRR1Q13601 381 aaKnown RBP13.23□□□□□ -0.29
SNX13-205ENST00000471744 HIKESHIQ53FT3 197 aa13.23□□□□□ -0.29
SNX13-205ENST00000471744 ALKBH2Q6NS38 261 aa13.23□□□□□ -0.29
SNX13-205ENST00000471744 SHQ1Q6PI26 577 aaKnown RBP13.23□□□□□ -0.29
SNX13-205ENST00000471744 SEZ6L2Q6UXD5 910 aa13.23□□□□□ -0.29
SNX13-205ENST00000471744 TMEM108Q6UXF1 575 aa13.23□□□□□ -0.29
SNX13-205ENST00000471744 THSD4Q6ZMP0 1018 aa13.23□□□□□ -0.29
SNX13-205ENST00000471744 DPPA2Q7Z7J5 298 aa13.23□□□□□ -0.29
SNX13-205ENST00000471744 FAM169BQ8N8A8 192 aa13.23□□□□□ -0.29
SNX13-205ENST00000471744 DNAJC9Q8WXX5 260 aa13.23□□□□□ -0.29
SNX13-205ENST00000471744 ZNF837Q96EG3 531 aaPredicted RBP13.23□□□□□ -0.29
SNX13-205ENST00000471744 PLPPR2Q96GM1 343 aa13.23□□□□□ -0.29
SNX13-205ENST00000471744 Q96M85 177 aa13.23□□□□□ -0.29
SNX13-205ENST00000471744 FEVQ99581 238 aa13.23□□□□□ -0.29
SNX13-205ENST00000471744 IFT27Q9BW83 186 aa13.23□□□□□ -0.29
SNX13-205ENST00000471744 NELFAQ9H3P2 528 aa13.23□□□□□ -0.29
SNX13-205ENST00000471744 DENND2DQ9H6A0 471 aaPredicted RBP13.23□□□□□ -0.29
SNX13-205ENST00000471744 IER3IP1Q9Y5U9 82 aa13.23□□□□□ -0.29
SNX13-205ENST00000471744 NBPF19A0A087WUL8 3843 aa13.22□□□□□ -0.29
SNX13-205ENST00000471744 A0A096LPE4 126 aa13.22□□□□□ -0.29
SNX13-205ENST00000471744 TEX13CA0A0J9YWL9 993 aa13.22□□□□□ -0.29
SNX13-205ENST00000471744 A0A1W2PPZ6 126 aa13.22□□□□□ -0.29
SNX13-205ENST00000471744 PRSS37A4D1T9 235 aa13.22□□□□□ -0.29
SNX13-205ENST00000471744 SIAH2O43255 324 aa13.22□□□□□ -0.29
SNX13-205ENST00000471744 CD3EP07766 207 aa13.22□□□□□ -0.29
SNX13-205ENST00000471744 OR8G3PP0DMU2 310 aa13.22□□□□□ -0.29
SNX13-205ENST00000471744 NPR2P20594 1047 aa13.22□□□□□ -0.29
SNX13-205ENST00000471744 NOS3P29474 1203 aa13.22□□□□□ -0.29
SNX13-205ENST00000471744 GUCA1AP43080 201 aaPredicted RBP13.22□□□□□ -0.29
SNX13-205ENST00000471744 IST1P53990 364 aa13.22□□□□□ -0.29
SNX13-205ENST00000471744 KPNB1Q14974 876 aaKnown RBP13.22□□□□□ -0.29
SNX13-205ENST00000471744 C3orf36Q3SXR2 165 aa13.22□□□□□ -0.29
SNX13-205ENST00000471744 NCMAPQ5T1S8 102 aa13.22□□□□□ -0.29
SNX13-205ENST00000471744 OR5K1Q8NHB7 308 aa13.22□□□□□ -0.29
SNX13-205ENST00000471744 GTPBP3Q969Y2 492 aaKnown RBP13.22□□□□□ -0.29
SNX13-205ENST00000471744 NMD3Q96D46 503 aaKnown RBP13.22□□□□□ -0.29
SNX13-205ENST00000471744 RADILQ96JH8 1075 aa13.22□□□□□ -0.29
SNX13-205ENST00000471744 SAMD8Q96LT4 415 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms