RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 PGAP1Q75T13 922 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 KDF1Q8NAX2 398 aaPredicted RBP12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 PARP12Q9H0J9 701 aaKnown RBP12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 I6L893 689 aaPredicted RBP12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 PRKACBP22694 351 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 CCR7P32248 378 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 RAB32Q13637 225 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 MEF2DQ14814 521 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 CD200R1Q8TD46 325 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 ACPTQ9BZG2 426 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 PCDHGA9Q9Y5G4 932 aaKnown RBP12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 PARP4Q9UKK3 1724 aaKnown RBP12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 WNT11O96014 354 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 LYRM7Q5U5X0 104 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 BTLAQ7Z6A9 289 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 C15orf54Q8N8G6 183 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 OR56B4Q8NH76 319 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 MENTQ9BUN1 341 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 CRISPLD2Q9H0B8 497 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 MRPS2Q9Y399 296 aaKnown RBP12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 F5H697 171 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 TNFRSF10AO00220 468 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 FAHP16930 419 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 PCGF2P35227 344 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 MFAP5Q13361 173 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 GLYR1Q49A26 553 aaPredicted RBP12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 PRSS48Q7RTY5 328 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 BARHL1Q9BZE3 327 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 PPP1R3CQ9UQK1 317 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 MMACHCQ9Y4U1 282 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 METTL15A6NJ78 407 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 OR13J1Q8NGT2 312 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 LILRB1Q8NHL6 650 aaPredicted RBP12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 BTNL2Q9UIR0 455 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 TAS2R46P59540 309 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 HBG1P69891 147 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 HBG2P69892 147 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 SEMA3BQ13214 749 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 NPY5RQ15761 445 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 HACD4Q5VWC8 232 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 DNAJC5GQ8N7S2 189 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 LRRC3CA6NJW4 275 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 ELLP55199 621 aaPredicted RBP12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 HBA1P69905 142 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 C17orf67Q0P5P2 114 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 GPR176Q14439 515 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 ZNF595Q8IYB9 648 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 DTWD1Q8N5C7 304 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 RANBP9Q96S59 729 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 EMC6Q9BV81 110 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 CRLF2Q9HC73 371 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 NME4O00746 187 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 ZNF749O43361 778 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 CDK5R2Q13319 367 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 PITHD1Q9GZP4 211 aaPredicted RBP12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 OR51J1Q9H342 316 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 FBXL2Q9UKC9 423 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 RNF150Q9ULK6 438 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 TMEM135Q86UB9 458 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 GMLQ99445 158 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 C1QTNF2Q9BXJ5 285 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 PLK3Q9H4B4 646 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 MYO16Q9Y6X6 1858 aa12.25□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 XKRY2A2RUG3 117 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 ADAM20O43506 726 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 PRKRAO75569 313 aaKnown RBP12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 NUDT3O95989 172 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 PLA1AQ53H76 456 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 ANKRD16Q6P6B7 361 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 SERPINA11Q86U17 422 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 OR5B3Q8NH48 314 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 RSRP1Q9BUV0 290 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 SRRQ9GZT4 340 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 TMPRSS5Q9H3S3 457 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 SPHK1Q9NYA1 384 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 PURGQ9UJV8 347 aaKnown RBP12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 ARFGEF2Q9Y6D5 1785 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 A0A096LPE4 126 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 A0A1W2PPZ6 126 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 GPR75O95800 540 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 KCNJ10P78508 379 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 RBM12BQ8IXT5 1001 aaKnown RBP12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 OR51H1Q8NH63 302 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 RPL3LQ92901 407 aaKnown RBP12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 LOC285095A0A1B0GVY8 99 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 P2RY10O00398 339 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 HPRP00739 348 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 FAM157BP0CG42 384 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 SLC15A4Q8N697 577 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 TMEM131LA2VDJ0 1609 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 SLC5A10A0PJK1 596 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 GATCO43716 136 aaKnown RBP12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 ZNF623O75123 536 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 ELAVL4P26378 380 aaKnown RBP12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 ERVFC1P60507 584 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 Q6ZRG5 221 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 MED25Q71SY5 747 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 SYT9Q86SS6 491 aa12.24□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 OR6V1Q8N148 313 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms