RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 RENP00797 406 aa16.98■□□□□ 0.31
PSPC1-203ENST00000471658 UQCRFS1P47985 274 aa16.98■□□□□ 0.31
PSPC1-203ENST00000471658 CDK5R2Q13319 367 aa16.98■□□□□ 0.31
PSPC1-203ENST00000471658 EIF2S3LQ2VIR3 472 aaKnown RBP16.98■□□□□ 0.31
PSPC1-203ENST00000471658 TSPO2Q5TGU0 170 aa16.98■□□□□ 0.31
PSPC1-203ENST00000471658 LRFN4Q6PJG9 635 aa16.98■□□□□ 0.31
PSPC1-203ENST00000471658 B3GLCTQ6Y288 498 aa16.98■□□□□ 0.31
PSPC1-203ENST00000471658 C20orf196Q8IYI0 205 aa16.98■□□□□ 0.31
PSPC1-203ENST00000471658 OR6V1Q8N148 313 aa16.98■□□□□ 0.31
PSPC1-203ENST00000471658 OR6N1Q8NGY5 312 aa16.98■□□□□ 0.31
PSPC1-203ENST00000471658 NMD3Q96D46 503 aaKnown RBP16.98■□□□□ 0.31
PSPC1-203ENST00000471658 FOXN4Q96NZ1 517 aa16.98■□□□□ 0.31
PSPC1-203ENST00000471658 DMRTA2Q96SC8 542 aa16.98■□□□□ 0.31
PSPC1-203ENST00000471658 NMNAT2Q9BZQ4 307 aa16.98■□□□□ 0.31
PSPC1-203ENST00000471658 OR51V1Q9H2C8 321 aa16.98■□□□□ 0.31
PSPC1-203ENST00000471658 PRSS50Q9UI38 385 aa16.98■□□□□ 0.31
PSPC1-203ENST00000471658 FOXD3Q9UJU5 478 aaPredicted RBP16.98■□□□□ 0.31
PSPC1-203ENST00000471658 RP1L1Q8IWN7 2480 aaPredicted RBP16.98■□□□□ 0.31
PSPC1-203ENST00000471658 ARHGAP21Q5T5U3 1957 aa16.97■□□□□ 0.31
PSPC1-203ENST00000471658 AKAP8O43823 692 aaKnown RBP16.97■□□□□ 0.31
PSPC1-203ENST00000471658 SLC16A7O60669 478 aa16.97■□□□□ 0.31
PSPC1-203ENST00000471658 CTLA4P16410 223 aa16.97■□□□□ 0.31
PSPC1-203ENST00000471658 GNLYP22749 145 aa16.97■□□□□ 0.31
PSPC1-203ENST00000471658 FMO3P31513 532 aa16.97■□□□□ 0.31
PSPC1-203ENST00000471658 PYCR1P32322 319 aa16.97■□□□□ 0.31
PSPC1-203ENST00000471658 CSNK1A1P48729 337 aa16.97■□□□□ 0.31
PSPC1-203ENST00000471658 CASP6P55212 293 aa16.97■□□□□ 0.31
PSPC1-203ENST00000471658 HIST3H3Q16695 136 aa16.97■□□□□ 0.31
PSPC1-203ENST00000471658 LINGO2Q7L985 606 aa16.97■□□□□ 0.31
PSPC1-203ENST00000471658 BTLAQ7Z6A9 289 aa16.97■□□□□ 0.31
PSPC1-203ENST00000471658 FBLIM1Q8WUP2 373 aa16.97■□□□□ 0.31
PSPC1-203ENST00000471658 MCHR2Q969V1 340 aa16.97■□□□□ 0.31
PSPC1-203ENST00000471658 ZNF582Q96NG8 517 aaPredicted RBP16.97■□□□□ 0.31
PSPC1-203ENST00000471658 ALG12Q9BV10 488 aa16.97■□□□□ 0.31
PSPC1-203ENST00000471658 SLC7A10Q9NS82 523 aa16.97■□□□□ 0.31
PSPC1-203ENST00000471658 PARPBPQ9NWS1 579 aa16.97■□□□□ 0.31
PSPC1-203ENST00000471658 GLTPQ9NZD2 209 aa16.97■□□□□ 0.31
PSPC1-203ENST00000471658 MEMO1Q9Y316 297 aa16.97■□□□□ 0.31
PSPC1-203ENST00000471658 EMC9Q9Y3B6 208 aa16.97■□□□□ 0.31
PSPC1-203ENST00000471658 HSPE1-MOB4S4R3N1 261 aa16.97■□□□□ 0.31
PSPC1-203ENST00000471658 A0A0G2JNJ9 132 aa16.96■□□□□ 0.31
PSPC1-203ENST00000471658 E9PLN8 166 aa16.96■□□□□ 0.31
PSPC1-203ENST00000471658 GPANK1O95872 356 aa16.96■□□□□ 0.31
PSPC1-203ENST00000471658 STSP08842 583 aa16.96■□□□□ 0.31
PSPC1-203ENST00000471658 QDPRP09417 244 aa16.96■□□□□ 0.31
PSPC1-203ENST00000471658 SPI1P17947 270 aa16.96■□□□□ 0.31
PSPC1-203ENST00000471658 NUDT6P53370 316 aa16.96■□□□□ 0.31
PSPC1-203ENST00000471658 MED21Q13503 144 aa16.96■□□□□ 0.31
PSPC1-203ENST00000471658 KLHL12Q53G59 568 aa16.96■□□□□ 0.31
PSPC1-203ENST00000471658 HDDC2Q7Z4H3 204 aa16.96■□□□□ 0.31
PSPC1-203ENST00000471658 ZNF100Q8IYN0 542 aa16.96■□□□□ 0.31
PSPC1-203ENST00000471658 NSMAFQ92636 917 aa16.96■□□□□ 0.31
PSPC1-203ENST00000471658 STARD4Q96DR4 205 aa16.96■□□□□ 0.31
PSPC1-203ENST00000471658 ZNF837Q96EG3 531 aaPredicted RBP16.96■□□□□ 0.31
PSPC1-203ENST00000471658 RBP7Q96R05 134 aa16.96■□□□□ 0.31
PSPC1-203ENST00000471658 SNX18Q96RF0 628 aa16.96■□□□□ 0.31
PSPC1-203ENST00000471658 VKORC1Q9BQB6 163 aa16.96■□□□□ 0.31
PSPC1-203ENST00000471658 AMBNQ9NP70 447 aa16.96■□□□□ 0.31
PSPC1-203ENST00000471658 Q9UFV3 132 aa16.96■□□□□ 0.31
PSPC1-203ENST00000471658 B9D1Q9UPM9 204 aa16.96■□□□□ 0.31
PSPC1-203ENST00000471658 CCL21O00585 134 aa16.96■□□□□ 0.3
PSPC1-203ENST00000471658 PAICSP22234 425 aaKnown RBP16.96■□□□□ 0.3
PSPC1-203ENST00000471658 SLC2A5P22732 501 aa16.96■□□□□ 0.3
PSPC1-203ENST00000471658 FOXG1P55316 489 aaPredicted RBP16.96■□□□□ 0.3
PSPC1-203ENST00000471658 APOFQ13790 326 aa16.96■□□□□ 0.3
PSPC1-203ENST00000471658 OCLNQ16625 522 aa16.96■□□□□ 0.3
PSPC1-203ENST00000471658 OTPQ5XKR4 325 aa16.96■□□□□ 0.3
PSPC1-203ENST00000471658 GALNT11Q8NCW6 608 aa16.96■□□□□ 0.3
PSPC1-203ENST00000471658 APH1AQ96BI3 265 aa16.96■□□□□ 0.3
PSPC1-203ENST00000471658 SLCO5A1Q9H2Y9 848 aa16.96■□□□□ 0.3
PSPC1-203ENST00000471658 CLN6Q9NWW5 311 aa16.96■□□□□ 0.3
PSPC1-203ENST00000471658 NBASA2RRP1 2371 aa16.95■□□□□ 0.3
PSPC1-203ENST00000471658 POLEQ07864 2286 aa16.95■□□□□ 0.3
PSPC1-203ENST00000471658 IGLV1-36A0A0B4J1U3 117 aa16.95■□□□□ 0.3
PSPC1-203ENST00000471658 MPZL2O60487 215 aa16.95■□□□□ 0.3
PSPC1-203ENST00000471658 OR3A2P47893 321 aa16.95■□□□□ 0.3
PSPC1-203ENST00000471658 SLC25A1P53007 311 aa16.95■□□□□ 0.3
PSPC1-203ENST00000471658 SLC25A30Q5SVS4 291 aa16.95■□□□□ 0.3
PSPC1-203ENST00000471658 RIPPLY2Q5TAB7 128 aa16.95■□□□□ 0.3
PSPC1-203ENST00000471658 NXNL2Q5VZ03 156 aa16.95■□□□□ 0.3
PSPC1-203ENST00000471658 KRT80Q6KB66 452 aa16.95■□□□□ 0.3
PSPC1-203ENST00000471658 SLC25A47Q6Q0C1 308 aa16.95■□□□□ 0.3
PSPC1-203ENST00000471658 LYPD4Q6UWN0 246 aa16.95■□□□□ 0.3
PSPC1-203ENST00000471658 OR6K3Q8NGY3 331 aa16.95■□□□□ 0.3
PSPC1-203ENST00000471658 PRR7Q8TB68 274 aa16.95■□□□□ 0.3
PSPC1-203ENST00000471658 ALKBH3Q96Q83 286 aaPredicted RBP16.95■□□□□ 0.3
PSPC1-203ENST00000471658 COA3Q9Y2R0 106 aaPredicted RBP16.95■□□□□ 0.3
PSPC1-203ENST00000471658 CCDC182A6NF36 153 aa16.94■□□□□ 0.3
PSPC1-203ENST00000471658 CENPBD1B2RD01 187 aa16.94■□□□□ 0.3
PSPC1-203ENST00000471658 SMNDC1O75940 238 aaKnown RBP eCLIP16.94■□□□□ 0.3
PSPC1-203ENST00000471658 CGAP01215 116 aa16.94■□□□□ 0.3
PSPC1-203ENST00000471658 CTSSP25774 331 aa16.94■□□□□ 0.3
PSPC1-203ENST00000471658 C6orf141Q5SZD1 244 aa16.94■□□□□ 0.3
PSPC1-203ENST00000471658 THEM4Q5T1C6 240 aa16.94■□□□□ 0.3
PSPC1-203ENST00000471658 TFAP2EQ6VUC0 442 aa16.94■□□□□ 0.3
PSPC1-203ENST00000471658 FJX1Q86VR8 437 aa16.94■□□□□ 0.3
PSPC1-203ENST00000471658 UBE2J2Q8N2K1 259 aa16.94■□□□□ 0.3
PSPC1-203ENST00000471658 GPR137CQ8N3F9 429 aa16.94■□□□□ 0.3
PSPC1-203ENST00000471658 HTRA1Q92743 480 aa16.94■□□□□ 0.3
PSPC1-203ENST00000471658 ULBP2Q9BZM5 246 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms