RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 CNTNAP1P78357 1384 aa5.03□□□□□ -1.6
NF1-208ENST00000471572 AK9Q5TCS8 1911 aa5.03□□□□□ -1.6
NF1-208ENST00000471572 C1orf232A0A0U1RR37 186 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 K7EQD1 137 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 UGT2B17O75795 530 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 PPP1R3DO95685 299 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 FGGP02679 453 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 RPN2P04844 631 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 RNH1P13489 461 aaKnown RBP5.02□□□□□ -1.61
NF1-208ENST00000471572 TCN1P20061 433 aaPredicted RBP5.02□□□□□ -1.61
NF1-208ENST00000471572 ITGB3BPQ13352 177 aaPredicted RBP5.02□□□□□ -1.61
NF1-208ENST00000471572 CERS6Q6ZMG9 384 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 HOGA1Q86XE5 327 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 MRPS31Q92665 395 aaKnown RBP5.02□□□□□ -1.61
NF1-208ENST00000471572 GTF2H4Q92759 462 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 ZNF300Q96RE9 604 aaPredicted RBP5.02□□□□□ -1.61
NF1-208ENST00000471572 TM2D1Q9BX74 207 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 ANKHQ9HCJ1 492 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 DEPPQ9NTK1 212 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 B3GNT2Q9NY97 397 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 MLXQ9UH92 298 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 CIDEBQ9UHD4 219 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 RIMS3Q9UJD0 308 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 NXT1Q9UKK6 140 aaKnown RBP5.02□□□□□ -1.61
NF1-208ENST00000471572 CBY1Q9Y3M2 126 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 ADGRA3Q8IWK6 1321 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 IGHV3-38A0A0C4DH36 116 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 SLC22A20A6NK97 555 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 ITGB1BP1O14713 200 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 XRCC2O43543 280 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 MAGEC1O60732 1142 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 HSBP1O75506 76 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 BCL3P20749 454 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 OPRL1P41146 370 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 CSKP41240 450 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 YAP1P46937 504 aaKnown RBP5.02□□□□□ -1.61
NF1-208ENST00000471572 MFAP2P55001 183 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 GPX6P59796 221 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 ADARB1P78563 741 aaKnown RBP5.02□□□□□ -1.61
NF1-208ENST00000471572 VLDLRP98155 873 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 ARL16Q0P5N6 197 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 CYP51A1Q16850 503 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.02□□□□□ -1.611e-7■■■■■ 27
NF1-208ENST00000471572 Q6ZRP5 223 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 FOXL2NBQ6ZUU3 175 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 TIPARPQ7Z3E1 657 aaKnown RBP5.02□□□□□ -1.61
NF1-208ENST00000471572 RNF10Q8N5U6 811 aaKnown RBP5.02□□□□□ -1.61
NF1-208ENST00000471572 EPYCQ99645 322 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 MCHR1Q99705 422 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 TMEM59Q9BXS4 323 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 POTEKPQ9BYX7 375 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 NSRP1Q9H0G5 558 aaKnown RBP5.02□□□□□ -1.61
NF1-208ENST00000471572 NXF3Q9H4D5 531 aaKnown RBP5.02□□□□□ -1.61
NF1-208ENST00000471572 UCK1Q9HA47 277 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 SLC2A6Q9UGQ3 507 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 COPS3Q9UNS2 423 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 RCL1Q9Y2P8 373 aaKnown RBP5.02□□□□□ -1.61
NF1-208ENST00000471572 TSSC4Q9Y5U2 329 aaPredicted RBP5.02□□□□□ -1.61
NF1-208ENST00000471572 CSNK1G3Q9Y6M4 447 aa5.02□□□□□ -1.61
NF1-208ENST00000471572 IGLV3-22A0A075B6J6 115 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 SOCS2O14508 198 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 TOR1AO14656 332 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 AP2A2O94973 939 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 PCCAP05165 728 aaPredicted RBP5.01□□□□□ -1.61
NF1-208ENST00000471572 P2RY2P41231 377 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 APOBEC3HQ6NTF7 200 aaKnown RBP5.01□□□□□ -1.61
NF1-208ENST00000471572 STPG4Q8N801 248 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 OR56B4Q8NH76 319 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 SLC7A13Q8TCU3 470 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 TMEM80Q96HE8 168 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 OSBPL10Q9BXB5 764 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 DMAP1Q9NPF5 467 aaPredicted RBP5.01□□□□□ -1.61
NF1-208ENST00000471572 NECAP2Q9NVZ3 263 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 PUS1Q9Y606 427 aaKnown RBP eCLIP5.01□□□□□ -1.61
NF1-208ENST00000471572 BCORQ6W2J9 1755 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 CDHR2Q9BYE9 1310 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 FRMPD3Q5JV73 1810 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 LOC100131303A0A0U1RQF7 123 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 MGAT4DA6NG13 374 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 C15orf61A6NNL5 157 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 STSP08842 583 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 CD48P09326 243 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 SYT1P21579 422 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 HTR2CP28335 458 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 HTR1FP30939 366 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 S100A5P33763 92 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 AQP2P41181 271 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 ATP4BP51164 291 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 FBXW4P57775 412 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 KIAA0141Q14154 515 aaPredicted RBP5.01□□□□□ -1.61
NF1-208ENST00000471572 GNMTQ14749 295 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 UPP1Q16831 310 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 TRMT5Q32P41 509 aaKnown RBP5.01□□□□□ -1.61
NF1-208ENST00000471572 EOGTQ5NDL2 527 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 PXDC1Q5TGL8 231 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 CRIP3Q6Q6R5 217 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 C3P1Q6ZMU1 363 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 OR2AP1Q8NGE2 309 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 IL1F10Q8WWZ1 152 aa5.01□□□□□ -1.61
NF1-208ENST00000471572 ACOT11Q8WXI4 607 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms