RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 TP53P04637 393 aaPredicted RBP13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 ZNF23P17027 643 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 IL32P24001 234 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 CLRN1P58418 232 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 ERVK-25P63136 954 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 RUNX1T1Q06455 604 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 MESTQ5EB52 335 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 CARD17Q5XLA6 110 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 OR7E24Q6IFN5 339 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 KLHL17Q6TDP4 642 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 ZNF627Q7L945 461 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 BHLHA15Q7RTS1 189 aaPredicted RBP13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 P2RY8Q86VZ1 359 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 PQLC1Q8N2U9 271 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 ATG16L2Q8NAA4 619 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 MAGEE2Q8TD90 523 aaPredicted RBP13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 SAMD8Q96LT4 415 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 DACH2Q96NX9 599 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 PLA2G12AQ9BZM1 189 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 ULBP2Q9BZM5 246 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 ACTR6Q9GZN1 396 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 EGLN3Q9H6Z9 239 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 CRLF2Q9HC73 371 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 GPR35Q9HC97 309 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 KIF17Q9P2E2 1029 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 REV1Q9UBZ9 1251 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 NDRG3Q9UGV2 375 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 IL20RAQ9UHF4 553 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 OAZ3Q9UMX2 235 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 MAGED1Q9Y5V3 778 aaPredicted RBP13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 ALPK2Q86TB3 2170 aa13.13□□□□□ -0.31
CDC42SE1-203ENST00000470278 NAV3Q8IVL0 2385 aa13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 TEX13CA0A0J9YWL9 993 aa13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 SH3D21A4FU49 640 aa13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 ZNF99A8MXY4 864 aaPredicted RBP13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 M0R3G1 203 aa13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 BHLHE40O14503 412 aa13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 PPP1R3DO95685 299 aa13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 PRKACGP22612 351 aa13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 ACVR1BP36896 505 aa13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 FOXG1P55316 489 aaPredicted RBP13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 KRR1Q13601 381 aaKnown RBP13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 GABRA6Q16445 453 aa13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 TIMM23BQ5SRD1 257 aa13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 PHYHD1Q5SRE7 291 aa13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 C10orf128Q5T292 105 aa13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 MEX3BQ6ZN04 569 aaKnown RBP13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 OR8D4Q8NGM9 314 aa13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 HDAC2Q92769 488 aaKnown RBP13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 S100PBPQ96BU1 408 aa13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 Q96M85 177 aa13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 MUS81Q96NY9 551 aa13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 SNX18Q96RF0 628 aa13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 IFT27Q9BW83 186 aa13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 SEMA6AQ9H2E6 1030 aa13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 TBC1D23Q9NUY8 699 aa13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 KCNN3Q9UGI6 736 aa13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 BAIAP2Q9UQB8 552 aa13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 POFUT2Q9Y2G5 429 aa13.12□□□□□ -0.31
CDC42SE1-203ENST00000470278 PRSS37A4D1T9 235 aa13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 OR5H1A6NKK0 313 aa13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 XKRYO14609 159 aa13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 RAD51DO75771 328 aa13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 SOX14O95416 240 aa13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 OSMP13725 252 aa13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 COX6B1P14854 86 aa13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 KIR2DL3P43628 341 aa13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 PPP2R2BQ00005 443 aa13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 CEACAM16Q2WEN9 425 aa13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 SLC36A3Q495N2 470 aa13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 NRN1LQ496H8 165 aa13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 THEM4Q5T1C6 240 aa13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 KDM4DQ6B0I6 523 aa13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 ANKRD16Q6P6B7 361 aa13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 LRFN4Q6PJG9 635 aa13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 LNX2Q8N448 690 aa13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 OR2T33Q8NG76 320 aa13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 OR1K1Q8NGR3 316 aa13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 TEX47Q8TBZ9 253 aa13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 FAM222BQ8WU58 562 aa13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 MCHR2Q969V1 340 aa13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 OBP2BQ9NPH6 170 aa13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 PAPOLBQ9NRJ5 636 aaKnown RBP13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 VSX1Q9NZR4 365 aaPredicted RBP13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 IER3IP1Q9Y5U9 82 aa13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 FLNAP21333 2647 aaKnown RBP13.11□□□□□ -0.31
CDC42SE1-203ENST00000470278 PRRC2AP48634 2157 aaKnown RBP13.1□□□□□ -0.31
CDC42SE1-203ENST00000470278 CIB4A0PJX0 185 aa13.1□□□□□ -0.31
CDC42SE1-203ENST00000470278 GOSR1O95249 250 aa13.1□□□□□ -0.31
CDC42SE1-203ENST00000470278 DAPP51397 102 aa13.1□□□□□ -0.31
CDC42SE1-203ENST00000470278 RIPPLY3P57055 190 aa13.1□□□□□ -0.31
CDC42SE1-203ENST00000470278 CD47Q08722 323 aa13.1□□□□□ -0.31
CDC42SE1-203ENST00000470278 TSC22D1Q15714 1073 aa13.1□□□□□ -0.31
CDC42SE1-203ENST00000470278 CLEC12AQ5QGZ9 265 aa13.1□□□□□ -0.31
CDC42SE1-203ENST00000470278 SYT14Q8NB59 555 aa13.1□□□□□ -0.31
CDC42SE1-203ENST00000470278 ICA1LQ8NDH6 482 aa13.1□□□□□ -0.31
CDC42SE1-203ENST00000470278 HSD17B8Q92506 261 aa13.1□□□□□ -0.31
CDC42SE1-203ENST00000470278 RASD2Q96D21 266 aa13.1□□□□□ -0.31
CDC42SE1-203ENST00000470278 ZNF837Q96EG3 531 aaPredicted RBP13.1□□□□□ -0.31
CDC42SE1-203ENST00000470278 WFIKKN1Q96NZ8 548 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms