RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 SH3GL3Q99963 347 aa12.71□□□□□ -0.37
SDCCAG3-209ENST00000468963 SIKE1Q9BRV8 207 aa12.71□□□□□ -0.37
SDCCAG3-209ENST00000468963 MRPL13Q9BYD1 178 aaKnown RBP12.71□□□□□ -0.37
SDCCAG3-209ENST00000468963 VIPAS39Q9H9C1 493 aa12.71□□□□□ -0.37
SDCCAG3-209ENST00000468963 MYEF2Q9P2K5 600 aaKnown RBP12.71□□□□□ -0.37
SDCCAG3-209ENST00000468963 A0A0G2JND7 137 aa12.7□□□□□ -0.38
SDCCAG3-209ENST00000468963 M0R233 179 aa12.7□□□□□ -0.38
SDCCAG3-209ENST00000468963 KPNA4O00629 521 aaPredicted RBP12.7□□□□□ -0.38
SDCCAG3-209ENST00000468963 BCL10O95999 233 aa12.7□□□□□ -0.38
SDCCAG3-209ENST00000468963 HPXP02790 462 aa12.7□□□□□ -0.38
SDCCAG3-209ENST00000468963 FUT1P19526 365 aa12.7□□□□□ -0.38
SDCCAG3-209ENST00000468963 TCN1P20061 433 aaPredicted RBP12.7□□□□□ -0.38
SDCCAG3-209ENST00000468963 APEX1P27695 318 aaKnown RBP12.7□□□□□ -0.38
SDCCAG3-209ENST00000468963 ALDH3B1P43353 468 aa12.7□□□□□ -0.38
SDCCAG3-209ENST00000468963 GALK2Q01415 458 aa12.7□□□□□ -0.38
SDCCAG3-209ENST00000468963 RUNX1T1Q06455 604 aa12.7□□□□□ -0.38
SDCCAG3-209ENST00000468963 MELKQ14680 651 aa12.7□□□□□ -0.38
SDCCAG3-209ENST00000468963 GKAP1Q5VSY0 366 aaPredicted RBP12.7□□□□□ -0.38
SDCCAG3-209ENST00000468963 NKAIN4Q8IVV8 208 aa12.7□□□□□ -0.38
SDCCAG3-209ENST00000468963 LINC01356Q8N9X3 169 aa12.7□□□□□ -0.38
SDCCAG3-209ENST00000468963 RASSF5Q8WWW0 418 aa12.7□□□□□ -0.38
SDCCAG3-209ENST00000468963 MCHR2Q969V1 340 aa12.7□□□□□ -0.38
SDCCAG3-209ENST00000468963 LRRC58Q96CX6 371 aa12.7□□□□□ -0.38
SDCCAG3-209ENST00000468963 SNX18Q96RF0 628 aa12.7□□□□□ -0.38
SDCCAG3-209ENST00000468963 SEPHS2Q99611 448 aa12.7□□□□□ -0.38
SDCCAG3-209ENST00000468963 SYT3Q9BQG1 590 aa12.7□□□□□ -0.38
SDCCAG3-209ENST00000468963 SLC7A8Q9UHI5 535 aa12.7□□□□□ -0.38
SDCCAG3-209ENST00000468963 FZR1Q9UM11 496 aa12.7□□□□□ -0.38
SDCCAG3-209ENST00000468963 BLOC1S5-TXNDC5H3BN57 136 aa12.69□□□□□ -0.38
SDCCAG3-209ENST00000468963 FXYD1O00168 92 aa12.69□□□□□ -0.38
SDCCAG3-209ENST00000468963 IGF2P01344 180 aa12.69□□□□□ -0.38
SDCCAG3-209ENST00000468963 MT-ND1P03886 318 aa12.69□□□□□ -0.38
SDCCAG3-209ENST00000468963 TSPAN19P0C672 248 aa12.69□□□□□ -0.38
SDCCAG3-209ENST00000468963 ZNF133P52736 654 aaPredicted RBP12.69□□□□□ -0.38
SDCCAG3-209ENST00000468963 UGT2B15P54855 530 aa12.69□□□□□ -0.38
SDCCAG3-209ENST00000468963 CDH15P55291 814 aa12.69□□□□□ -0.38
SDCCAG3-209ENST00000468963 RPS23P62266 143 aaKnown RBP12.69□□□□□ -0.38
SDCCAG3-209ENST00000468963 NRN1LQ496H8 165 aa12.69□□□□□ -0.38
SDCCAG3-209ENST00000468963 RABL3Q5HYI8 236 aa12.69□□□□□ -0.38
SDCCAG3-209ENST00000468963 CARM1Q86X55 608 aa12.69□□□□□ -0.38
SDCCAG3-209ENST00000468963 PAQR4Q8N4S7 273 aaPredicted RBP12.69□□□□□ -0.38
SDCCAG3-209ENST00000468963 OR4K5Q8NGD3 323 aa12.69□□□□□ -0.38
SDCCAG3-209ENST00000468963 OR8J3Q8NGG0 315 aa12.69□□□□□ -0.38
SDCCAG3-209ENST00000468963 LIPHQ8WWY8 451 aa12.69□□□□□ -0.38
SDCCAG3-209ENST00000468963 ZNF583Q96ND8 569 aa12.69□□□□□ -0.38
SDCCAG3-209ENST00000468963 SH3GL1Q99961 368 aa12.69□□□□□ -0.38
SDCCAG3-209ENST00000468963 RACGAP1Q9H0H5 632 aa12.69□□□□□ -0.38
SDCCAG3-209ENST00000468963 DUSP13Q9UII6 198 aa12.69□□□□□ -0.38
SDCCAG3-209ENST00000468963 TMEFF2Q9UIK5 374 aaPredicted RBP12.69□□□□□ -0.38
SDCCAG3-209ENST00000468963 RIMS3Q9UJD0 308 aa12.69□□□□□ -0.38
SDCCAG3-209ENST00000468963 SH3GLB1Q9Y371 365 aa12.69□□□□□ -0.38
SDCCAG3-209ENST00000468963 CENPBD1B2RD01 187 aa12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 ENTPD5O75356 428 aa12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 TRMUO75648 421 aaKnown RBP12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 OR7A10O76100 309 aa12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 FARS2O95363 451 aaKnown RBP12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 NPPAP01160 153 aa12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 IGHG1P01857 330 aa12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 F13BP05160 661 aa12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 UMPSP11172 480 aa12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 H2AFXP16104 143 aaPredicted RBP12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 TNFRSF1BP20333 461 aa12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 HNF1AP20823 631 aa12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 RBM34P42696 430 aaKnown RBP12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 TMEM33P57088 247 aa12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 SRSF2Q01130 221 aaKnown RBP12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 RPL18Q07020 188 aaKnown RBP12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 MAD2L1BPQ15013 274 aaPredicted RBP12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 COQ5Q5HYK3 327 aa12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 UGT2A3Q6UWM9 527 aa12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 DPPA2Q7Z7J5 298 aa12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 SLC30A7Q8NEW0 376 aa12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 PFN4Q8NHR9 129 aa12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 RDH5Q92781 318 aa12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 YIPF5Q969M3 257 aa12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 ZNF347Q96SE7 839 aa12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 ECSITQ9BQ95 431 aa12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 TMEM120AQ9BXJ8 343 aa12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 POLR2J2Q9GZM3 115 aaKnown RBP12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 POLR2J3Q9H1A7 115 aaKnown RBP12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 C20orf141Q9NUB4 165 aa12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 BAG5Q9UL15 447 aa12.68□□□□□ -0.38
SDCCAG3-209ENST00000468963 A0A1W2PRG6 482 aa12.67□□□□□ -0.38
SDCCAG3-209ENST00000468963 SLC22A23A1A5C7 686 aa12.67□□□□□ -0.38
SDCCAG3-209ENST00000468963 MGRN1O60291 552 aa12.67□□□□□ -0.38
SDCCAG3-209ENST00000468963 OR5F1O95221 314 aa12.67□□□□□ -0.38
SDCCAG3-209ENST00000468963 CLPTM1O96005 669 aa12.67□□□□□ -0.38
SDCCAG3-209ENST00000468963 MMP7P09237 267 aaPredicted RBP12.67□□□□□ -0.38
SDCCAG3-209ENST00000468963 NAT2P11245 290 aa12.67□□□□□ -0.38
SDCCAG3-209ENST00000468963 CCL2P13500 99 aa12.67□□□□□ -0.38
SDCCAG3-209ENST00000468963 ZNF250P15622 560 aa12.67□□□□□ -0.38
SDCCAG3-209ENST00000468963 ACADSP16219 412 aa12.67□□□□□ -0.38
SDCCAG3-209ENST00000468963 ACHEP22303 614 aa12.67□□□□□ -0.38
SDCCAG3-209ENST00000468963 LSP1P33241 339 aa12.67□□□□□ -0.38
SDCCAG3-209ENST00000468963 AQP2P41181 271 aa12.67□□□□□ -0.38
SDCCAG3-209ENST00000468963 DVL1P1P54792 670 aaPredicted RBP12.67□□□□□ -0.38
SDCCAG3-209ENST00000468963 MRPS11P82912 194 aaKnown RBP12.67□□□□□ -0.38
SDCCAG3-209ENST00000468963 MYBPC1Q00872 1141 aa12.67□□□□□ -0.38
SDCCAG3-209ENST00000468963 KLF10Q13118 480 aa12.67□□□□□ -0.38
SDCCAG3-209ENST00000468963 PIN1Q13526 163 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms