RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 NAXDQ8IW45 347 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 SLC15A4Q8N697 577 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 TMEM104Q8NE00 496 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 OR13H1Q8NG92 308 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 BCL7CQ8WUZ0 217 aaPredicted RBP8.03□□□□□ -1.12
HPS4-209ENST00000466781 CHTF18Q8WVB6 975 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 OR1E3Q8WZA6 343 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 ZNF582Q96NG8 517 aaPredicted RBP8.03□□□□□ -1.12
HPS4-209ENST00000466781 IP6K3Q96PC2 410 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 KCNJ15Q99712 375 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 FOXQ1Q9C009 403 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 RIMS4Q9H426 269 aaPredicted RBP8.03□□□□□ -1.12
HPS4-209ENST00000466781 MED17Q9NVC6 651 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 KLF13Q9Y2Y9 288 aaPredicted RBP8.03□□□□□ -1.12
HPS4-209ENST00000466781 PCDHGA5Q9Y5G8 931 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 TMEM72A0PK05 275 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 PRKACAP17612 351 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 PPIAP62937 165 aaKnown RBP8.03□□□□□ -1.12
HPS4-209ENST00000466781 FOXC1Q12948 553 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 BEX5Q5H9J7 111 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 DBX2Q6ZNG2 339 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 NCCRP1Q6ZVX7 275 aaPredicted RBP8.03□□□□□ -1.12
HPS4-209ENST00000466781 H2BFWTQ7Z2G1 175 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 OR5M1Q8NGP8 315 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 GGHQ92820 318 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 PIGTQ969N2 578 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 SLC39A13Q96H72 371 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 PRRX2Q99811 253 aa8.03□□□□□ -1.12
HPS4-209ENST00000466781 TMEM82A0PJX8 343 aa8.02□□□□□ -1.12
HPS4-209ENST00000466781 IGFBP6P24592 240 aaPredicted RBP8.02□□□□□ -1.12
HPS4-209ENST00000466781 ZNF468Q5VIY5 522 aaPredicted RBP8.02□□□□□ -1.12
HPS4-209ENST00000466781 YOD1Q5VVQ6 348 aaPredicted RBP8.02□□□□□ -1.12
HPS4-209ENST00000466781 ZNF626Q68DY1 528 aa8.02□□□□□ -1.12
HPS4-209ENST00000466781 FAM111BQ6SJ93 734 aa8.02□□□□□ -1.12
HPS4-209ENST00000466781 GJC3Q8NFK1 279 aa8.02□□□□□ -1.12
HPS4-209ENST00000466781 GIMAP1Q8WWP7 306 aa8.02□□□□□ -1.12
HPS4-209ENST00000466781 SLC35A4Q96G79 324 aa8.02□□□□□ -1.12
HPS4-209ENST00000466781 MBOAT4Q96T53 435 aa8.02□□□□□ -1.12
HPS4-209ENST00000466781 PDCD1LG2Q9BQ51 273 aa8.02□□□□□ -1.12
HPS4-209ENST00000466781 ZNF436Q9C0F3 470 aaPredicted RBP8.02□□□□□ -1.12
HPS4-209ENST00000466781 VAPAQ9P0L0 249 aa8.02□□□□□ -1.12
HPS4-209ENST00000466781 MUTYHQ9UIF7 546 aa8.02□□□□□ -1.12
HPS4-209ENST00000466781 CORINQ9Y5Q5 1042 aa8.02□□□□□ -1.12
HPS4-209ENST00000466781 TSTD3H0UI37 97 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 LGALS8O00214 317 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 HS3ST1O14792 307 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 GPRIN2O60269 458 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 FBXO24O75426 580 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 IGFBP1P08833 259 aaPredicted RBP8.02□□□□□ -1.13
HPS4-209ENST00000466781 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.02□□□□□ -1.13
HPS4-209ENST00000466781 ZNF691Q5VV52 312 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 SIRT6Q8N6T7 355 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 KIRREL1Q96J84 757 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 ELF4Q99607 663 aaPredicted RBP8.02□□□□□ -1.13
HPS4-209ENST00000466781 EDEM2Q9BV94 578 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 ADAM19Q9H013 955 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 ARV1Q9H2C2 271 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 TMEM9BQ9NQ34 198 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 NRIP3Q9NQ35 241 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 TREX1Q9NSU2 369 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 QPCTLQ9NXS2 382 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 FBXO4Q9UKT5 387 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 HS3ST2Q9Y278 367 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 ZNF831Q5JPB2 1677 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 SLC35E2P0CK97 266 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 NKX2-5P52952 324 aaPredicted RBP8.02□□□□□ -1.13
HPS4-209ENST00000466781 SORDQ00796 357 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 RBMS2Q15434 407 aaKnown RBP8.02□□□□□ -1.13
HPS4-209ENST00000466781 RTL8BQ17RB0 113 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 GGTA1PQ4G0N0 100 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 DPY19L2P2Q6ZN68 376 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 PLPP5Q8NEB5 264 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 ARPC5LQ9BPX5 153 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 MED18Q9BUE0 208 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 KIR3DX1Q9H7L2 352 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 ARNTLO00327 626 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 PMP2P02689 132 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 GLAP06280 429 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 OR2T7P0C7T2 308 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 HNRNPFP52597 415 aaKnown RBP8.02□□□□□ -1.13
HPS4-209ENST00000466781 DLX5P56178 289 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 HBA1P69905 142 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 FLI1Q01543 452 aaPredicted RBP8.02□□□□□ -1.13
HPS4-209ENST00000466781 C1orf53Q5VUE5 145 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 ZNF836Q6ZNA1 936 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 B3GNT8Q7Z7M8 397 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 ZNF546Q86UE3 836 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 OR10J5Q8NHC4 309 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 FAM213BQ8TBF2 198 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 TMEM174Q8WUU8 243 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 ANKRD60Q9BZ19 345 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 OR52A5Q9H2C5 316 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 FAM212BQ9NTI7 297 aaPredicted RBP8.02□□□□□ -1.13
HPS4-209ENST00000466781 PURGQ9UJV8 347 aaKnown RBP8.02□□□□□ -1.13
HPS4-209ENST00000466781 RCE1Q9Y256 329 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 TRBV4-1A0A0J9YWV2 114 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 SLC5A10A0PJK1 596 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 A6NIN4 97 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 EFSO43281 561 aa8.02□□□□□ -1.13
HPS4-209ENST00000466781 YIF1AO95070 293 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms