RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 SMARCD3Q6STE5 483 aa9.04□□□□□ -0.96
PMF1-204ENST00000466489 GFRALQ6UXV0 394 aa9.04□□□□□ -0.96
PMF1-204ENST00000466489 ZNF619Q8N2I2 560 aa9.04□□□□□ -0.96
PMF1-204ENST00000466489 ARIH2OSQ8N7S6 290 aa9.04□□□□□ -0.96
PMF1-204ENST00000466489 ZNF485Q8NCK3 441 aa9.04□□□□□ -0.96
PMF1-204ENST00000466489 GALNT11Q8NCW6 608 aa9.04□□□□□ -0.96
PMF1-204ENST00000466489 UBASH3BQ8TF42 649 aa9.04□□□□□ -0.96
PMF1-204ENST00000466489 TAAR6Q96RI8 345 aa9.04□□□□□ -0.96
PMF1-204ENST00000466489 SDF2Q99470 211 aa9.04□□□□□ -0.96
PMF1-204ENST00000466489 HDHD2Q9H0R4 259 aa9.04□□□□□ -0.96
PMF1-204ENST00000466489 MED28Q9H204 178 aa9.04□□□□□ -0.96
PMF1-204ENST00000466489 SLC38A1Q9H2H9 487 aa9.04□□□□□ -0.96
PMF1-204ENST00000466489 LDAHQ9H6V9 325 aa9.04□□□□□ -0.96
PMF1-204ENST00000466489 CMC2Q9NRP2 79 aa9.04□□□□□ -0.96
PMF1-204ENST00000466489 DEPPQ9NTK1 212 aa9.04□□□□□ -0.96
PMF1-204ENST00000466489 DKKL1Q9UK85 242 aa9.04□□□□□ -0.96
PMF1-204ENST00000466489 ZNF443Q9Y2A4 671 aaPredicted RBP9.04□□□□□ -0.96
PMF1-204ENST00000466489 SHANK1Q9Y566 2161 aa9.04□□□□□ -0.96
PMF1-204ENST00000466489 ESPL1Q14674 2120 aa9.04□□□□□ -0.96
PMF1-204ENST00000466489 NBASA2RRP1 2371 aa9.04□□□□□ -0.96
PMF1-204ENST00000466489 A0A0G2JMM0 328 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 A0A1W2PPB8 328 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 A0A1W2PQD3 144 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 A0A1W2PRS3 328 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 FAM166BA8MTA8 275 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 KIR3DP1A8MWS1 328 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 ALG1L2C9J202 215 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 NPIPA5E9PKD4 350 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 GTPBP1O00178 669 aaKnown RBP9.03□□□□□ -0.96
PMF1-204ENST00000466489 GABRPO00591 440 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 GNB5O14775 395 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 KALRNO60229 2985 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 CDC40O60508 579 aaKnown RBP eCLIP9.03□□□□□ -0.96
PMF1-204ENST00000466489 CBR3O75828 277 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 TRAPPC6AO75865 159 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 IFNA7P01567 189 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 TP53P04637 393 aaPredicted RBP9.03□□□□□ -0.96
PMF1-204ENST00000466489 CHRM4P08173 479 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 STOMP27105 288 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 APEX1P27695 318 aaKnown RBP9.03□□□□□ -0.96
PMF1-204ENST00000466489 MSX1P28360 303 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 SLC6A1P30531 599 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 RFC3P40938 356 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 BLVRAP53004 296 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 ARPC4P59998 168 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 FABP5Q01469 135 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 GTF3C1Q12789 2109 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 SLC10A1Q14973 349 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 BAK1Q16611 211 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 PRR30Q53SZ7 412 aaPredicted RBP9.03□□□□□ -0.96
PMF1-204ENST00000466489 YIF1BQ5BJH7 314 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 RPS26P11Q5JNZ5 115 aaPredicted RBP9.03□□□□□ -0.96
PMF1-204ENST00000466489 ZNF57Q68EA5 555 aaPredicted RBP9.03□□□□□ -0.96
PMF1-204ENST00000466489 RPL22L1Q6P5R6 122 aaKnown RBP9.03□□□□□ -0.96
PMF1-204ENST00000466489 LRRN1Q6UXK5 716 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 FGD2Q7Z6J4 655 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 CLIP4Q8N3C7 705 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 ST6GALNAC3Q8NDV1 305 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 OR5W2Q8NH69 310 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 PHOSPHO1Q8TCT1 267 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 TMEM239Q8WW34 195 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 GPR137Q96N19 417 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 ATF6BQ99941 703 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 SLX1AQ9BQ83 275 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 THAP7Q9BT49 309 aaPredicted RBP9.03□□□□□ -0.96
PMF1-204ENST00000466489 ZNF350Q9GZX5 532 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 C11orf54Q9H0W9 315 aaPredicted RBP9.03□□□□□ -0.96
PMF1-204ENST00000466489 CLEC4MQ9H2X3 399 aaPredicted RBP9.03□□□□□ -0.96
PMF1-204ENST00000466489 UBQLN3Q9H347 655 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 ZNF703Q9H7S9 590 aaPredicted RBP9.03□□□□□ -0.96
PMF1-204ENST00000466489 GALNT9Q9HCQ5 603 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 B3GNT2Q9NY97 397 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 TAS2R8Q9NYW2 309 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 NPIPA1Q9UND3 350 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 CAMK2AQ9UQM7 478 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 ZNF407Q9C0G0 2248 aa9.03□□□□□ -0.96
PMF1-204ENST00000466489 PRRC2CQ9Y520 2896 aaKnown RBP9.02□□□□□ -0.96
PMF1-204ENST00000466489 CDHR4A6H8M9 788 aa9.02□□□□□ -0.97
PMF1-204ENST00000466489 ANKUB1A6NFN9 424 aa9.02□□□□□ -0.97
PMF1-204ENST00000466489 NOTOA8MTQ0 251 aa9.02□□□□□ -0.97
PMF1-204ENST00000466489 LRRN3E7EW58 273 aa9.02□□□□□ -0.97
PMF1-204ENST00000466489 J3QRE1 110 aa9.02□□□□□ -0.97
PMF1-204ENST00000466489 M0R3H8 397 aa9.02□□□□□ -0.97
PMF1-204ENST00000466489 RNF13O43567 381 aa9.02□□□□□ -0.97
PMF1-204ENST00000466489 GSTZ1O43708 216 aaPredicted RBP9.02□□□□□ -0.97
PMF1-204ENST00000466489 FADS1O60427 444 aa9.02□□□□□ -0.97
PMF1-204ENST00000466489 NOS1APO75052 506 aaPredicted RBP9.02□□□□□ -0.97
PMF1-204ENST00000466489 GLSO94925 669 aaPredicted RBP9.02□□□□□ -0.97
PMF1-204ENST00000466489 NUDT14O95848 222 aa9.02□□□□□ -0.97
PMF1-204ENST00000466489 IGKV1D-16P01601 117 aa9.02□□□□□ -0.97
PMF1-204ENST00000466489 APEHP13798 732 aaKnown RBP9.02□□□□□ -0.97
PMF1-204ENST00000466489 ABOP16442 354 aa9.02□□□□□ -0.97
PMF1-204ENST00000466489 AHCYP23526 432 aa9.02□□□□□ -0.97
PMF1-204ENST00000466489 NOS3P29474 1203 aa9.02□□□□□ -0.97
PMF1-204ENST00000466489 FAUP35544 74 aaKnown RBP9.02□□□□□ -0.97
PMF1-204ENST00000466489 MAGEA5P43359 124 aa9.02□□□□□ -0.97
PMF1-204ENST00000466489 MMP15P51511 669 aa9.02□□□□□ -0.97
PMF1-204ENST00000466489 ZNF41P51814 821 aaPredicted RBP9.02□□□□□ -0.97
PMF1-204ENST00000466489 PRPS1P60891 318 aa9.02□□□□□ -0.97
PMF1-204ENST00000466489 MXD1Q05195 221 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms