RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 LMO4P61968 165 aa17.61■□□□□ 0.41
COL6A1-203ENST00000466285 GALK2Q01415 458 aa17.61■□□□□ 0.41
COL6A1-203ENST00000466285 GLO1Q04760 184 aa17.61■□□□□ 0.41
COL6A1-203ENST00000466285 CYP51A1Q16850 503 aa17.61■□□□□ 0.41
COL6A1-203ENST00000466285 OR4K5Q8NGD3 323 aa17.61■□□□□ 0.41
COL6A1-203ENST00000466285 OR6X1Q8NH79 312 aa17.61■□□□□ 0.41
COL6A1-203ENST00000466285 LRRC8CQ8TDW0 803 aa17.61■□□□□ 0.41
COL6A1-203ENST00000466285 ADAMTS16Q8TE57 1224 aa17.61■□□□□ 0.41
COL6A1-203ENST00000466285 RDH5Q92781 318 aa17.61■□□□□ 0.41
COL6A1-203ENST00000466285 ZNF347Q96SE7 839 aa17.61■□□□□ 0.41
COL6A1-203ENST00000466285 ZNF426Q9BUY5 554 aa17.61■□□□□ 0.41
COL6A1-203ENST00000466285 MEPEQ9NQ76 525 aaPredicted RBP17.61■□□□□ 0.41
COL6A1-203ENST00000466285 HIF1ANQ9NWT6 349 aa17.61■□□□□ 0.41
COL6A1-203ENST00000466285 SLC7A8Q9UHI5 535 aa17.61■□□□□ 0.41
COL6A1-203ENST00000466285 SLC13A4Q9UKG4 626 aa17.61■□□□□ 0.41
COL6A1-203ENST00000466285 VSTM5A8MXK1 200 aa17.6■□□□□ 0.41
COL6A1-203ENST00000466285 CDC14BO60729 498 aa17.6■□□□□ 0.41
COL6A1-203ENST00000466285 FMO6PO60774 539 aa17.6■□□□□ 0.41
COL6A1-203ENST00000466285 GAAP10253 952 aa17.6■□□□□ 0.41
COL6A1-203ENST00000466285 ATP4BP51164 291 aa17.6■□□□□ 0.41
COL6A1-203ENST00000466285 LIPNQ5VXI9 398 aa17.6■□□□□ 0.41
COL6A1-203ENST00000466285 GLCCI1Q86VQ1 547 aa17.6■□□□□ 0.41
COL6A1-203ENST00000466285 C11orf65Q8NCR3 313 aa17.6■□□□□ 0.41
COL6A1-203ENST00000466285 SLC30A7Q8NEW0 376 aa17.6■□□□□ 0.41
COL6A1-203ENST00000466285 PFN4Q8NHR9 129 aa17.6■□□□□ 0.41
COL6A1-203ENST00000466285 TMEM186Q96B77 213 aa17.6■□□□□ 0.41
COL6A1-203ENST00000466285 IGKV1D-43A0A0B4J1Z2 117 aa17.59■□□□□ 0.41
COL6A1-203ENST00000466285 EVPLLA8MZ36 301 aa17.59■□□□□ 0.41
COL6A1-203ENST00000466285 B4DSR2 109 aa17.59■□□□□ 0.41
COL6A1-203ENST00000466285 DHHO43323 396 aa17.59■□□□□ 0.41
COL6A1-203ENST00000466285 PPIHO43447 177 aaKnown RBP17.59■□□□□ 0.41
COL6A1-203ENST00000466285 RNF13O43567 381 aa17.59■□□□□ 0.41
COL6A1-203ENST00000466285 SERPINB7O75635 380 aa17.59■□□□□ 0.41
COL6A1-203ENST00000466285 MSMBP08118 114 aa17.59■□□□□ 0.41
COL6A1-203ENST00000466285 QDPRP09417 244 aa17.59■□□□□ 0.41
COL6A1-203ENST00000466285 ASAH2BP0C7U1 165 aa17.59■□□□□ 0.41
COL6A1-203ENST00000466285 GZMMP51124 257 aa17.59■□□□□ 0.41
COL6A1-203ENST00000466285 AGBL2Q5U5Z8 902 aa17.59■□□□□ 0.41
COL6A1-203ENST00000466285 ZNF566Q969W8 418 aa17.59■□□□□ 0.41
COL6A1-203ENST00000466285 LRRC37BQ96QE4 947 aa17.59■□□□□ 0.41
COL6A1-203ENST00000466285 CGREF1Q99674 301 aa17.59■□□□□ 0.41
COL6A1-203ENST00000466285 MS4A5Q9H3V2 200 aa17.59■□□□□ 0.41
COL6A1-203ENST00000466285 TAAR3PQ9P1P4 343 aa17.59■□□□□ 0.41
COL6A1-203ENST00000466285 SPEF1Q9Y4P9 236 aa17.59■□□□□ 0.41
COL6A1-203ENST00000466285 SHOX2O60902 331 aaPredicted RBP17.58■□□□□ 0.4
COL6A1-203ENST00000466285 FUT4P22083 530 aa17.58■□□□□ 0.4
COL6A1-203ENST00000466285 UGT2B15P54855 530 aa17.58■□□□□ 0.4
COL6A1-203ENST00000466285 RPS23P62266 143 aaKnown RBP17.58■□□□□ 0.4
COL6A1-203ENST00000466285 CCL8P80075 99 aa17.58■□□□□ 0.4
COL6A1-203ENST00000466285 ZP4Q12836 540 aa17.58■□□□□ 0.4
COL6A1-203ENST00000466285 NKPD1Q17RQ9 610 aa17.58■□□□□ 0.4
COL6A1-203ENST00000466285 RGS7BPQ6MZT1 257 aaPredicted RBP17.58■□□□□ 0.4
COL6A1-203ENST00000466285 ZNF771Q7L3S4 317 aaPredicted RBP17.58■□□□□ 0.4
COL6A1-203ENST00000466285 PIWIL3Q7Z3Z3 882 aaKnown RBP17.58■□□□□ 0.4
COL6A1-203ENST00000466285 SLC25A44Q96H78 314 aaPredicted RBP17.58■□□□□ 0.4
COL6A1-203ENST00000466285 OCEL1Q9H607 264 aa17.58■□□□□ 0.4
COL6A1-203ENST00000466285 LEF1Q9UJU2 399 aaPredicted RBP17.58■□□□□ 0.4
COL6A1-203ENST00000466285 TRIM33Q9UPN9 1127 aa17.58■□□□□ 0.4
COL6A1-203ENST00000466285 CORO2BQ9UQ03 480 aa17.58■□□□□ 0.4
COL6A1-203ENST00000466285 WNK2Q9Y3S1 2297 aa17.58■□□□□ 0.4
COL6A1-203ENST00000466285 IGLV3-9A0A075B6K5 115 aa17.57■□□□□ 0.4
COL6A1-203ENST00000466285 SLC2A10O95528 541 aa17.57■□□□□ 0.4
COL6A1-203ENST00000466285 F13BP05160 661 aa17.57■□□□□ 0.4
COL6A1-203ENST00000466285 MMP7P09237 267 aaPredicted RBP17.57■□□□□ 0.4
COL6A1-203ENST00000466285 OR8G3PP0DMU2 310 aa17.57■□□□□ 0.4
COL6A1-203ENST00000466285 H2AFXP16104 143 aaPredicted RBP17.57■□□□□ 0.4
COL6A1-203ENST00000466285 FUT1P19526 365 aa17.57■□□□□ 0.4
COL6A1-203ENST00000466285 PCGF2P35227 344 aa17.57■□□□□ 0.4
COL6A1-203ENST00000466285 MVKQ03426 396 aa17.57■□□□□ 0.4
COL6A1-203ENST00000466285 FMODQ06828 376 aa17.57■□□□□ 0.4
COL6A1-203ENST00000466285 RPL18Q07020 188 aaKnown RBP17.57■□□□□ 0.4
COL6A1-203ENST00000466285 RBBP4Q09028 425 aa17.57■□□□□ 0.4
COL6A1-203ENST00000466285 NKAIN4Q8IVV8 208 aa17.57■□□□□ 0.4
COL6A1-203ENST00000466285 DPP10Q8N608 796 aa17.57■□□□□ 0.4
COL6A1-203ENST00000466285 SYT14Q8NB59 555 aa17.57■□□□□ 0.4
COL6A1-203ENST00000466285 NOXO1Q8NFA2 376 aa17.57■□□□□ 0.4
COL6A1-203ENST00000466285 BHLHE22Q8NFJ8 381 aaPredicted RBP17.57■□□□□ 0.4
COL6A1-203ENST00000466285 MCHR2Q969V1 340 aa17.57■□□□□ 0.4
COL6A1-203ENST00000466285 KAT8Q9H7Z6 458 aaKnown RBP17.57■□□□□ 0.4
COL6A1-203ENST00000466285 NANSQ9NR45 359 aa17.57■□□□□ 0.4
COL6A1-203ENST00000466285 C20orf141Q9NUB4 165 aa17.57■□□□□ 0.4
COL6A1-203ENST00000466285 ZNF229Q9UJW7 825 aa17.57■□□□□ 0.4
COL6A1-203ENST00000466285 UGT2A1Q9Y4X1 527 aa17.57■□□□□ 0.4
COL6A1-203ENST00000466285 LOC105371242A0A075B767 164 aa17.56■□□□□ 0.4
COL6A1-203ENST00000466285 TRAPPC13A5PLN9 417 aa17.56■□□□□ 0.4
COL6A1-203ENST00000466285 C17orf100A8MU93 164 aa17.56■□□□□ 0.4
COL6A1-203ENST00000466285 PIP5K1CO60331 668 aa17.56■□□□□ 0.4
COL6A1-203ENST00000466285 DEAF1O75398 565 aaPredicted RBP17.56■□□□□ 0.4
COL6A1-203ENST00000466285 OR6A2O95222 327 aa17.56■□□□□ 0.4
COL6A1-203ENST00000466285 UMPSP11172 480 aa17.56■□□□□ 0.4
COL6A1-203ENST00000466285 CDAP32320 146 aa17.56■□□□□ 0.4
COL6A1-203ENST00000466285 HIST3H3Q16695 136 aa17.56■□□□□ 0.4
COL6A1-203ENST00000466285 SPRNQ5BIV9 151 aa17.56■□□□□ 0.4
COL6A1-203ENST00000466285 TTC33Q6PID6 262 aaPredicted RBP17.56■□□□□ 0.4
COL6A1-203ENST00000466285 NANOGNBQ7Z5D8 188 aa17.56■□□□□ 0.4
COL6A1-203ENST00000466285 LRRC18Q8N456 261 aa17.56■□□□□ 0.4
COL6A1-203ENST00000466285 ICA1LQ8NDH6 482 aa17.56■□□□□ 0.4
COL6A1-203ENST00000466285 CPEB3Q8NE35 698 aaKnown RBP17.56■□□□□ 0.4
COL6A1-203ENST00000466285 MOSPD2Q8NHP6 518 aa17.56■□□□□ 0.4
COL6A1-203ENST00000466285 TMEM255BQ8WV15 326 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms