RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 SP3Q02447 781 aa17.93■□□□□ 0.46
SDF4-205ENST00000465727 DHRS2Q13268 280 aa17.93■□□□□ 0.46
SDF4-205ENST00000465727 FGL2Q14314 439 aa17.93■□□□□ 0.46
SDF4-205ENST00000465727 RAB11BQ15907 218 aa17.93■□□□□ 0.46
SDF4-205ENST00000465727 TMED4Q7Z7H5 227 aa17.93■□□□□ 0.46
SDF4-205ENST00000465727 CDC20BQ86Y33 519 aa17.93■□□□□ 0.46
SDF4-205ENST00000465727 DVL3Q92997 716 aaPredicted RBP17.93■□□□□ 0.46
SDF4-205ENST00000465727 SPACA6W5XKT8 324 aa17.93■□□□□ 0.46
SDF4-205ENST00000465727 EML5Q05BV3 1969 aa17.93■□□□□ 0.46
SDF4-205ENST00000465727 PDE4DIPQ5VU43 2346 aa17.93■□□□□ 0.46
SDF4-205ENST00000465727 H0YC42 278 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 SLC17A2O00624 439 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 ID2Q02363 134 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 MESP2Q0VG99 397 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 TAF13Q15543 124 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 ZNF511Q8NB15 262 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 DMBX1Q8NFW5 382 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 STOML3Q8TAV4 291 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 ZCCHC10Q8TBK6 192 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 FAM3DQ96BQ1 224 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 GPR174Q9BXC1 333 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 ZNF768Q9H5H4 540 aaKnown RBP17.92■□□□□ 0.46
SDF4-205ENST00000465727 MBNL1Q9NR56 388 aaKnown RBP17.92■□□□□ 0.46
SDF4-205ENST00000465727 COLEC10Q9Y6Z7 277 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 COL4A2P08572 1712 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 MEIS3P1A6NDR6 274 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 HEXAP06865 529 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 ADCYAP1P18509 176 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 CASRP41180 1078 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 EGR3Q06889 387 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 EXOSC7Q15024 291 aaKnown RBP17.92■□□□□ 0.46
SDF4-205ENST00000465727 GUCA2BQ16661 112 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 ATPAF1Q5TC12 328 aaPredicted RBP17.92■□□□□ 0.46
SDF4-205ENST00000465727 ABHD13Q7L211 337 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 EXD3Q8N9H8 876 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 OR1J2Q8NGS2 313 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 GLYATL2Q8WU03 294 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 ZNF707Q96C28 371 aaPredicted RBP17.92■□□□□ 0.46
SDF4-205ENST00000465727 ASF1BQ9NVP2 202 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 MKL2Q9ULH7 1088 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 ERVK-19Q9WJR5 959 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 KLHDC2Q9Y2U9 406 aa17.92■□□□□ 0.46
SDF4-205ENST00000465727 GPR75O95800 540 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 AMY2AP04746 511 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 INHAP05111 366 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 NR0B1P51843 470 aaKnown RBP17.91■□□□□ 0.46
SDF4-205ENST00000465727 SNRPNP63162 240 aaKnown RBP17.91■□□□□ 0.46
SDF4-205ENST00000465727 MGAT2Q10469 447 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 C2orf76Q3KRA6 126 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 FAM122BQ7Z309 247 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 INO80EQ8NBZ0 244 aaPredicted RBP17.91■□□□□ 0.46
SDF4-205ENST00000465727 PPP1R1CQ8WVI7 109 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 ARL11Q969Q4 196 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 CTHRC1Q96CG8 243 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 SEH1LQ96EE3 360 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 FANCFQ9NPI8 374 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 ZFP57Q9NU63 452 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 NOP16Q9Y3C1 178 aaKnown RBP17.91■□□□□ 0.46
SDF4-205ENST00000465727 NOTCH4Q99466 2003 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 EFCAB7A8K855 629 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 F5H0A9 414 aaPredicted RBP17.91■□□□□ 0.46
SDF4-205ENST00000465727 FGF17O60258 216 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 CD74P04233 296 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 ITGA5P08648 1049 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 CDKN2AP42771 156 aaKnown RBP17.91■□□□□ 0.46
SDF4-205ENST00000465727 INPP5JQ15735 1006 aaPredicted RBP17.91■□□□□ 0.46
SDF4-205ENST00000465727 ARHGAP40Q5TG30 622 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 FCRL6Q6DN72 434 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 RAB12Q6IQ22 244 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 SKA3Q8IX90 412 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 THAP6Q8TBB0 222 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 DOK4Q8TEW6 326 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 SUSD6Q92537 303 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 SLC22A18Q96BI1 424 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 ZBTB8AQ96BR9 441 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 ATG5Q9H1Y0 275 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 ZNF304Q9HCX3 659 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 DEC1Q9P2X7 70 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 LAMP5Q9UJQ1 280 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 IKZF2Q9UKS7 526 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 TMEM14AQ9Y6G1 99 aa17.91■□□□□ 0.46
SDF4-205ENST00000465727 OR2AT4A6NND4 320 aa17.9■□□□□ 0.46
SDF4-205ENST00000465727 FAM171A2A8MVW0 826 aa17.9■□□□□ 0.46
SDF4-205ENST00000465727 SULT2B1O00204 365 aa17.9■□□□□ 0.46
SDF4-205ENST00000465727 GNB5O14775 395 aa17.9■□□□□ 0.46
SDF4-205ENST00000465727 PHYHO14832 338 aa17.9■□□□□ 0.46
SDF4-205ENST00000465727 HLA-AP01891 365 aaKnown RBP17.9■□□□□ 0.46
SDF4-205ENST00000465727 BLOC1S1P78537 153 aa17.9■□□□□ 0.46
SDF4-205ENST00000465727 AVPI1Q5T686 147 aa17.9■□□□□ 0.46
SDF4-205ENST00000465727 FBXO42Q6P3S6 717 aa17.9■□□□□ 0.46
SDF4-205ENST00000465727 RTL10Q7L3V2 364 aa17.9■□□□□ 0.46
SDF4-205ENST00000465727 BIVMQ86UB2 503 aa17.9■□□□□ 0.46
SDF4-205ENST00000465727 CBLN2Q8IUK8 224 aa17.9■□□□□ 0.46
SDF4-205ENST00000465727 GTPBP8Q8N3Z3 284 aaPredicted RBP17.9■□□□□ 0.46
SDF4-205ENST00000465727 ASB12Q8WXK4 309 aa17.9■□□□□ 0.46
SDF4-205ENST00000465727 OR2A5Q96R48 311 aa17.9■□□□□ 0.46
SDF4-205ENST00000465727 TMEM100Q9NV29 134 aa17.9■□□□□ 0.46
SDF4-205ENST00000465727 CYB5AP00167 134 aa17.89■□□□□ 0.45
SDF4-205ENST00000465727 SERTAD2Q14140 314 aa17.89■□□□□ 0.45
SDF4-205ENST00000465727 ZNF141Q15928 474 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms