RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 RPL35P42766 123 aaKnown RBP6.62□□□□□ -1.35
USP48-206ENST00000464577 CDKN2AP42771 156 aaKnown RBP6.62□□□□□ -1.35
USP48-206ENST00000464577 FNTBP49356 437 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 UBE2IP63279 158 aaKnown RBP6.62□□□□□ -1.35
USP48-206ENST00000464577 GAB4Q2WGN9 574 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 ATPAF1Q5TC12 328 aaPredicted RBP6.62□□□□□ -1.35
USP48-206ENST00000464577 AGBL4Q5VU57 503 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 YOD1Q5VVQ6 348 aaPredicted RBP6.62□□□□□ -1.35
USP48-206ENST00000464577 FCRL6Q6DN72 434 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 FAM166AQ6J272 317 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 FBXO42Q6P3S6 717 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 FDX2Q6P4F2 183 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 ZNF813Q6ZN06 617 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 BIVMQ86UB2 503 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 SPAG16Q8N0X2 631 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 ZNF676Q8N7Q3 588 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 ZNF614Q8N883 585 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 LRRC75AQ8NAA5 344 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 ZNF511Q8NB15 262 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 DMBX1Q8NFW5 382 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 OR1M1Q8NGA1 313 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 OR51D1Q8NGF3 324 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 OR1J4Q8NGS1 313 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 STOML3Q8TAV4 291 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 LIPHQ8WWY8 451 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 SMARCD2Q92925 531 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 TMEM106AQ96A25 262 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 SLC25A28Q96A46 364 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 SLC22A18Q96BI1 424 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 FAM3DQ96BQ1 224 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 C4orf45Q96LM5 186 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 ZNF75AQ96N20 296 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 LRRC3BQ96PB8 259 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 ZNF471Q9BX82 626 aaPredicted RBP6.62□□□□□ -1.35
USP48-206ENST00000464577 GPR174Q9BXC1 333 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 TWSG1Q9GZX9 223 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 ZNF230Q9UIE0 474 aaPredicted RBP6.62□□□□□ -1.35
USP48-206ENST00000464577 PCDHB10Q9UN67 800 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 INSL6Q9Y581 213 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 A0A0A6YYH2 397 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 A6NJ64 397 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 PRSS44E7EML9 344 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 NPIPB9F8W1W9 429 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 H0YC42 278 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 SULT2B1O00204 365 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 CYR61O00622 381 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 DOK2O60496 412 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 RAD1O60671 282 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 SLC25A12O75746 678 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 CD14P08571 375 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 CT62P0C5K7 136 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 ZNF735P0CB33 412 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 CEBPBP17676 345 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 ADCYAP1P18509 176 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 MPZP25189 248 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 CASRP41180 1078 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 MEOX2P50222 304 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 AKR1D1P51857 326 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 PRMT2P55345 433 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 DHRS2Q13268 280 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 ALG11Q2TAA5 492 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 C2orf76Q3KRA6 126 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 ZNF528Q3MIS6 628 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 NDUFAF7Q7L592 441 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 FAM122BQ7Z309 247 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 OR52R1Q8NGF1 315 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 OR1S2Q8NGQ3 325 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 OR1J2Q8NGS2 313 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 FLVCR1-AS1Q8TAF5 88 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 DOK4Q8TEW6 326 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 LCN9Q8WX39 176 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 HERVK_113Q902F9 699 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 RSC1A1Q92681 617 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 SEH1LQ96EE3 360 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 HHIPL1Q96JK4 782 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 ESRP2Q9H6T0 727 aaKnown RBP6.62□□□□□ -1.35
USP48-206ENST00000464577 WDR76Q9H967 626 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 TMEM74BQ9NUR3 256 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 TMEM100Q9NV29 134 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 SLC2A8Q9NY64 477 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 PLEKHA6Q9Y2H5 1048 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 HIF3AQ9Y2N7 669 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 TMEM14AQ9Y6G1 99 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 NOTCH4Q99466 2003 aa6.62□□□□□ -1.35
USP48-206ENST00000464577 TP53BP1Q12888 1972 aaPredicted RBP6.61□□□□□ -1.35
USP48-206ENST00000464577 FAM171A2A8MVW0 826 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 F8VVB4 439 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 F8VWA3 439 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 GNB5O14775 395 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 NARSO43776 548 aaKnown RBP6.61□□□□□ -1.35
USP48-206ENST00000464577 IL2RAP01589 272 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 IGKV1D-16P01601 117 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 AMY2AP04746 511 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 HEXAP06865 529 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 ITGA5P08648 1049 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 HNRNPA1P09651 372 aaKnown RBP eCLIP6.61□□□□□ -1.35
USP48-206ENST00000464577 CD37P11049 281 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 ALOX5APP20292 161 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 SDHAP31040 664 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 KIR3DL2P43630 455 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms