RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 GUCA2AQ02747 115 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 DUSP8Q13202 625 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 CBFBQ13951 182 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 CDK5R1Q15078 307 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 CLPPQ16740 277 aaPredicted RBP8.31□□□□□ -1.08
HPS4-208ENST00000464362 FAM57BQ71RH2 274 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 PRR18Q8N4B5 295 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 TP53I13Q8NBR0 393 aaPredicted RBP8.31□□□□□ -1.08
HPS4-208ENST00000464362 ST6GAL2Q96JF0 529 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 RGCCQ9H4X1 137 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 PLEKHJ1Q9NW61 149 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 PPIL1Q9Y3C6 166 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 SLC22A7Q9Y694 548 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 DOCK6Q96HP0 2047 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 OTOL1A6NHN0 477 aaPredicted RBP8.31□□□□□ -1.08
HPS4-208ENST00000464362 ATP6V1G2-DDX39BF2Z307 99 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 P2RX6O15547 441 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 RAD51DO75771 328 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 GLCEO94923 617 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 APOC1P02654 83 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 RAB3AP20336 220 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 S100A11P31949 105 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 TAS2R20P59543 309 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 RSU1Q15404 277 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 MLF2Q15773 248 aaPredicted RBP8.31□□□□□ -1.08
HPS4-208ENST00000464362 DUSP6Q16828 381 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 TMEM244Q5VVB8 128 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 CD276Q5ZPR3 534 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 GPR139Q6DWJ6 353 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 PXKQ7Z7A4 578 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 ZNF595Q8IYB9 648 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 SLC41A2Q96JW4 573 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 BANF2Q9H503 90 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 WDR76Q9H967 626 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 SLC25A19Q9HC21 320 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 FANCFQ9NPI8 374 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 C19orf25Q9UFG5 118 aaPredicted RBP8.31□□□□□ -1.08
HPS4-208ENST00000464362 KCNG2Q9UJ96 466 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 SPTBN1Q01082 2364 aaKnown RBP8.31□□□□□ -1.08
HPS4-208ENST00000464362 AGAP14A8MT82 685 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 WDPCPO95876 746 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 EPXP11678 715 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 OTX2P32243 289 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 PPP1CAP62136 330 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 C3orf33Q6P1S2 294 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 ZNF784Q8NCA9 323 aaPredicted RBP8.31□□□□□ -1.08
HPS4-208ENST00000464362 GPR119Q8TDV5 335 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 MAFIPQ8WZ33 124 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 MAP6Q96JE9 813 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 FGF21Q9NSA1 209 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 SCML1Q9UN30 329 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 TMED7-TICAM2A0A0A6YYA0 188 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 IFITM5A6NNB3 132 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 GCM2O75603 506 aaPredicted RBP8.3□□□□□ -1.08
HPS4-208ENST00000464362 RAB6AP20340 208 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 SLC6A8P48029 635 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 GFERP55789 205 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 BIDP55957 195 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 CDK5Q00535 292 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 C17orf107Q6ZR85 190 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 DCXRQ7Z4W1 244 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 ZNF611Q8N823 705 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 OR4D9Q8NGE8 314 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 OR5D14Q8NGL3 314 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 OR10R2Q8NGX6 335 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 RBPMSQ93062 196 aaKnown RBP8.3□□□□□ -1.08
HPS4-208ENST00000464362 SMIM19Q96E16 107 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 ZNF649Q9BS31 505 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 PPA2Q9H2U2 334 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 HRASLSQ9HDD0 168 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 EHFQ9NZC4 300 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 UBE2J1Q9Y385 318 aaPredicted RBP8.3□□□□□ -1.08
HPS4-208ENST00000464362 TMED7Q9Y3B3 224 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 TRBV11-1A0A0K0K1C0 115 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 TSPAN11A1L157 253 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 TMEM212A6NML5 194 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 GALR3O60755 368 aaPredicted RBP8.3□□□□□ -1.08
HPS4-208ENST00000464362 ZNF254O75437 659 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 CNOT4O95628 575 aaKnown RBP8.3□□□□□ -1.08
HPS4-208ENST00000464362 RAF1P04049 648 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 CALCBP10092 127 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 ADH6P28332 368 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 CAMLGP49069 296 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 PCBP4P57723 403 aaKnown RBP8.3□□□□□ -1.08
HPS4-208ENST00000464362 CCINQ13939 588 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 ZNF79Q15937 498 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 P4HA3Q7Z4N8 544 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 KIAA1958Q8N8K9 716 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 FOXRED1Q96CU9 486 aaPredicted RBP8.3□□□□□ -1.08
HPS4-208ENST00000464362 LRRC3BQ96PB8 259 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 C1QTNF6Q9BXI9 259 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 MIXL1Q9H2W2 232 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 CCDC86Q9H6F5 360 aaKnown RBP8.3□□□□□ -1.08
HPS4-208ENST00000464362 EMC7Q9NPA0 242 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 MED29Q9NX70 200 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.3□□□□□ -1.08
HPS4-208ENST00000464362 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.3□□□□□ -1.08
HPS4-208ENST00000464362 ARRDC5A6NEK1 342 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 PMP2P02689 132 aa8.3□□□□□ -1.08
HPS4-208ENST00000464362 CD3DP04234 171 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms