RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 CCDC86Q9H6F5 360 aaKnown RBP13.02□□□□□ -0.32
HDAC6-213ENST00000462730 ST6GALNAC2Q9UJ37 374 aa13.02□□□□□ -0.32
HDAC6-213ENST00000462730 CMAHPQ9Y471 501 aa13.02□□□□□ -0.32
HDAC6-213ENST00000462730 A0A1W2PQ09 198 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 A0A1W2PRG6 482 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 DVL2O14641 736 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 CASKO14936 926 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 PLPP2O43688 288 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 TRIM3O75382 744 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-213ENST00000462730 CCL3P10147 92 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 CD53P19397 219 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 GALP22466 123 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 HSF2Q03933 536 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 PUDPQ08623 228 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 MELKQ14680 651 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 GLYR1Q49A26 553 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-213ENST00000462730 DMKNQ6E0U4 476 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-213ENST00000462730 IL22RA1Q8N6P7 574 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 ASCC1Q8N9N2 400 aaKnown RBP13.01□□□□□ -0.33
HDAC6-213ENST00000462730 NEIL3Q8TAT5 605 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 POTEKPQ9BYX7 375 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 PTGES2Q9H7Z7 377 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 CHST11Q9NPF2 352 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 SERINC1Q9NRX5 453 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 HPF1Q9NWY4 346 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 IL17BQ9UHF5 180 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 POLHQ9Y253 713 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 ASPMQ8IZT6 3477 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 ZFHX2Q9C0A1 2572 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-213ENST00000462730 PRSS37A4D1T9 235 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 LIPT2A6NK58 231 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 HLA-DOBP13765 273 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 MRPS15P82914 257 aaKnown RBP13.01□□□□□ -0.33
HDAC6-213ENST00000462730 FOXK1P85037 733 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 TRAM1Q15629 374 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 TMEM81Q6P7N7 255 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 H1FNTQ75WM6 255 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-213ENST00000462730 ASCL5Q7RTU5 278 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 TIGD4Q8IY51 512 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 DND1Q8IYX4 353 aaKnown RBP13.01□□□□□ -0.33
HDAC6-213ENST00000462730 KDM8Q8N371 416 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 NKD1Q969G9 470 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 FRMD6Q96NE9 622 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 TMEM185BQ9H7F4 350 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 TIGARQ9NQ88 270 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 ACOXLQ9NUZ1 547 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 ALKBH4Q9NXW9 302 aa13.01□□□□□ -0.33
HDAC6-213ENST00000462730 PLEKHB1Q9UF11 243 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-213ENST00000462730 CELSR3Q9NYQ7 3312 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 CUL9Q8IWT3 2517 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 PTPRBP23467 1997 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 MEIOCA2RUB1 952 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 CENPXA8MT69 81 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 CDRT15L2A8MXV6 281 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 G3V3Y1 287 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 MS4A18H0YCH9 400 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 SERPINA7P05543 415 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 GAAP10253 952 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 RBMS1P29558 406 aaKnown RBP13□□□□□ -0.33
HDAC6-213ENST00000462730 NOVA1P51513 510 aaKnown RBP13□□□□□ -0.33
HDAC6-213ENST00000462730 MAP2K6P52564 334 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 CAV3P56539 151 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 TLE3Q04726 772 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 SCN1BQ07699 218 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 ZP4Q12836 540 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 ASAH1Q13510 395 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 CDK5R1Q15078 307 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 TAB1Q15750 504 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 MS4A18Q3C1V0 323 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 B3GNTL1Q67FW5 361 aaPredicted RBP13□□□□□ -0.33
HDAC6-213ENST00000462730 C3orf33Q6P1S2 294 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 PLCZ1Q86YW0 608 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 ZNF248Q8NDW4 579 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 ADAMTS17Q8TE56 1095 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 PAQR8Q8TEZ7 354 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 NXPE2Q96DL1 559 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 PGLYRP3Q96LB9 341 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 C5orf34Q96MH7 638 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 ANGPTL4Q9BY76 406 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 FAM117AQ9C073 453 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 KCNN2Q9H2S1 579 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 SH2D2AQ9NP31 389 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 VSX1Q9NZR4 365 aaPredicted RBP13□□□□□ -0.33
HDAC6-213ENST00000462730 KLHDC2Q9Y2U9 406 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 SHISA3A0PJX4 238 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 A8MV72 311 aaPredicted RBP13□□□□□ -0.33
HDAC6-213ENST00000462730 PRR32B1ATL7 298 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 NPIPA5E9PKD4 350 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 TM4SF5O14894 197 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 OGG1O15527 345 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 ALX3O95076 343 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 AKR7A3O95154 331 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 GPANK1O95872 356 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 OPN1LWP04000 364 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 CEACAM1P13688 526 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 EDNRAP25101 427 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 CD82P27701 267 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 PSMB10P40306 273 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 CENPAP49450 140 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 MYBPHQ13203 477 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms