RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 CLEC1AQ8NC01 280 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 OR9A4Q8NGU2 314 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 GPR148Q8TDV2 347 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 AMELYQ99218 206 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 COMMD4Q9H0A8 199 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 FAM74A7A6NL05 159 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 IFI6P09912 130 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 PRKACAP17612 351 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 PRSS3P35030 304 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 KIR3DL2P43630 455 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 FNTBP49356 437 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 PPP1CAP62136 330 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 ZNF74Q16587 644 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 ITPRIPL2Q3MIP1 535 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 FAM74A3Q4VXF1 159 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 SDR16C5Q8N3Y7 309 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 OR10K1Q8NGX5 313 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 BAHD1Q8TBE0 780 aaPredicted RBP16.73■□□□□ 0.27
HPS3-204ENST00000462030 ATOH1Q92858 354 aaPredicted RBP16.73■□□□□ 0.27
HPS3-204ENST00000462030 TWSG1Q9GZX9 223 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 WDR13Q9H1Z4 485 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 CDV3Q9UKY7 258 aaKnown RBP16.73■□□□□ 0.27
HPS3-204ENST00000462030 HIF3AQ9Y2N7 669 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 SLC6A5Q9Y345 797 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 A6NCN8 305 aa16.72■□□□□ 0.27
HPS3-204ENST00000462030 OR2W5A6NFC9 320 aa16.72■□□□□ 0.27
HPS3-204ENST00000462030 ELOA3DA6NLF2 546 aaPredicted RBP16.72■□□□□ 0.27
HPS3-204ENST00000462030 RAD1O60671 282 aa16.72■□□□□ 0.27
HPS3-204ENST00000462030 WDPCPO95876 746 aa16.72■□□□□ 0.27
HPS3-204ENST00000462030 WNT11O96014 354 aa16.72■□□□□ 0.27
HPS3-204ENST00000462030 SDHAP31040 664 aa16.72■□□□□ 0.27
HPS3-204ENST00000462030 SCAND1P57086 179 aa16.72■□□□□ 0.27
HPS3-204ENST00000462030 DEFB110Q30KQ9 67 aa16.72■□□□□ 0.27
HPS3-204ENST00000462030 C2orf76Q3KRA6 126 aa16.72■□□□□ 0.27
HPS3-204ENST00000462030 ELOA3BQ3SY89 546 aa16.72■□□□□ 0.27
HPS3-204ENST00000462030 SFTPA2Q8IWL1 248 aa16.72■□□□□ 0.27
HPS3-204ENST00000462030 ELOA3Q8NG57 546 aa16.72■□□□□ 0.27
HPS3-204ENST00000462030 RSC1A1Q92681 617 aa16.72■□□□□ 0.27
HPS3-204ENST00000462030 PELOQ9BRX2 385 aaKnown RBP16.72■□□□□ 0.27
HPS3-204ENST00000462030 SLC25A32Q9H2D1 315 aa16.72■□□□□ 0.27
HPS3-204ENST00000462030 MRTO4Q9UKD2 239 aaKnown RBP16.72■□□□□ 0.27
HPS3-204ENST00000462030 PCOLCE2Q9UKZ9 415 aa16.72■□□□□ 0.27
HPS3-204ENST00000462030 NDUFA2O43678 99 aa16.72■□□□□ 0.27
HPS3-204ENST00000462030 APODP05090 189 aa16.72■□□□□ 0.27
HPS3-204ENST00000462030 ITGB2P05107 769 aa16.72■□□□□ 0.27
HPS3-204ENST00000462030 MESTQ5EB52 335 aa16.72■□□□□ 0.27
HPS3-204ENST00000462030 TMED4Q7Z7H5 227 aa16.72■□□□□ 0.27
HPS3-204ENST00000462030 ZNF546Q86UE3 836 aa16.72■□□□□ 0.27
HPS3-204ENST00000462030 TSEN15Q8WW01 171 aaKnown RBP16.72■□□□□ 0.27
HPS3-204ENST00000462030 MCHR2Q969V1 340 aa16.72■□□□□ 0.27
HPS3-204ENST00000462030 LRRC46Q96FV0 321 aa16.72■□□□□ 0.27
HPS3-204ENST00000462030 PAWRQ96IZ0 340 aaKnown RBP16.72■□□□□ 0.27
HPS3-204ENST00000462030 GAL3ST1Q99999 423 aa16.72■□□□□ 0.27
HPS3-204ENST00000462030 TMEM212A6NML5 194 aa16.71■□□□□ 0.27
HPS3-204ENST00000462030 OIP5O43482 229 aa16.71■□□□□ 0.27
HPS3-204ENST00000462030 EIF4E2O60573 245 aaKnown RBP16.71■□□□□ 0.27
HPS3-204ENST00000462030 OR4E1P0C645 316 aa16.71■□□□□ 0.27
HPS3-204ENST00000462030 CT45A8P0DMV1 189 aa16.71■□□□□ 0.27
HPS3-204ENST00000462030 CT45A9P0DMV2 189 aa16.71■□□□□ 0.27
HPS3-204ENST00000462030 DEFA5Q01523 94 aa16.71■□□□□ 0.27
HPS3-204ENST00000462030 EIF2B5Q13144 721 aaKnown RBP16.71■□□□□ 0.27
HPS3-204ENST00000462030 ZNF169Q14929 603 aaPredicted RBP16.71■□□□□ 0.27
HPS3-204ENST00000462030 CT45A2Q5DJT8 189 aa16.71■□□□□ 0.27
HPS3-204ENST00000462030 WDR38Q5JTN6 314 aa16.71■□□□□ 0.27
HPS3-204ENST00000462030 GABRG1Q8N1C3 465 aa16.71■□□□□ 0.27
HPS3-204ENST00000462030 SLC25A28Q96A46 364 aa16.71■□□□□ 0.27
HPS3-204ENST00000462030 FAM3DQ96BQ1 224 aa16.71■□□□□ 0.27
HPS3-204ENST00000462030 LMF1Q96S06 567 aa16.71■□□□□ 0.27
HPS3-204ENST00000462030 NPAS1Q99742 590 aa16.71■□□□□ 0.27
HPS3-204ENST00000462030 PLA2G2FQ9BZM2 168 aa16.71■□□□□ 0.27
HPS3-204ENST00000462030 C1orf198Q9H425 327 aa16.71■□□□□ 0.27
HPS3-204ENST00000462030 BARX1Q9HBU1 254 aaPredicted RBP16.71■□□□□ 0.27
HPS3-204ENST00000462030 Q9N2J8 555 aa16.71■□□□□ 0.27
HPS3-204ENST00000462030 IL23AQ9NPF7 189 aa16.71■□□□□ 0.27
HPS3-204ENST00000462030 MGMTP16455 207 aa16.71■□□□□ 0.26
HPS3-204ENST00000462030 ALOX5APP20292 161 aa16.71■□□□□ 0.26
HPS3-204ENST00000462030 CCR4P51679 360 aa16.71■□□□□ 0.26
HPS3-204ENST00000462030 ARHGAP40Q5TG30 622 aa16.71■□□□□ 0.26
HPS3-204ENST00000462030 ELP2Q6IA86 826 aa16.71■□□□□ 0.26
HPS3-204ENST00000462030 C12orf45Q8N5I9 185 aaPredicted RBP16.71■□□□□ 0.26
HPS3-204ENST00000462030 BCORP1Q8N888 145 aa16.71■□□□□ 0.26
HPS3-204ENST00000462030 C4orf45Q96LM5 186 aa16.71■□□□□ 0.26
HPS3-204ENST00000462030 TSPAN32Q96QS1 320 aa16.71■□□□□ 0.26
HPS3-204ENST00000462030 ZNF416Q9BWM5 594 aa16.71■□□□□ 0.26
HPS3-204ENST00000462030 ATG5Q9H1Y0 275 aa16.71■□□□□ 0.26
HPS3-204ENST00000462030 RASL12Q9NYN1 266 aa16.71■□□□□ 0.26
HPS3-204ENST00000462030 FBXO4Q9UKT5 387 aa16.71■□□□□ 0.26
HPS3-204ENST00000462030 TMEM82A0PJX8 343 aa16.7■□□□□ 0.26
HPS3-204ENST00000462030 M0QYG6 137 aa16.7■□□□□ 0.26
HPS3-204ENST00000462030 CDC40O60508 579 aaKnown RBP eCLIP16.7■□□□□ 0.26
HPS3-204ENST00000462030 ZNF432O94892 652 aa16.7■□□□□ 0.26
HPS3-204ENST00000462030 GUSBP08236 651 aa16.7■□□□□ 0.26
HPS3-204ENST00000462030 UBBP0CG47 229 aa16.7■□□□□ 0.26
HPS3-204ENST00000462030 UBCP0CG48 685 aaKnown RBP16.7■□□□□ 0.26
HPS3-204ENST00000462030 CCKBRP32239 447 aa16.7■□□□□ 0.26
HPS3-204ENST00000462030 RPS27AP62979 156 aaKnown RBP16.7■□□□□ 0.26
HPS3-204ENST00000462030 UBA52P62987 128 aaKnown RBP16.7■□□□□ 0.26
HPS3-204ENST00000462030 ASPHD2Q6ICH7 369 aa16.7■□□□□ 0.26
HPS3-204ENST00000462030 GALNT16Q8N428 558 aa16.7■□□□□ 0.26
HPS3-204ENST00000462030 STEAP2Q8NFT2 490 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms