RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 GREB1Q4ZG55 1949 aa3.29□□□□□ -1.88
UBA3-204ENST00000461522 REV3LO60673 3130 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 PLXNA3P51805 1871 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 CUL9Q8IWT3 2517 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 DOCK6Q96HP0 2047 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 IGHV4-30-2A0A087WSY4 118 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 A0A1B0GUH1 482 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 TSPAN11A1L157 253 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 USP27XA6NNY8 438 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 G3V2L1 256 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 M0R296 226 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 WWP2O00308 870 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 LIN7AO14910 233 aaPredicted RBP3.28□□□□□ -1.88
UBA3-204ENST00000461522 B4GAT1O43505 415 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 LCMT2O60294 686 aaKnown RBP3.28□□□□□ -1.88
UBA3-204ENST00000461522 RAD51DO75771 328 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 ANXA9O76027 345 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 FGGP02679 453 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 FCER2P06734 321 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 RPS17P08708 135 aaKnown RBP3.28□□□□□ -1.88
UBA3-204ENST00000461522 ANXA4P09525 319 aaPredicted RBP3.28□□□□□ -1.88
UBA3-204ENST00000461522 RAB40ALP0C0E4 278 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 CCDC166P0CW27 439 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 PNMTP11086 282 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 M6PRP20645 277 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 EEF1B2P24534 225 aaKnown RBP3.28□□□□□ -1.88
UBA3-204ENST00000461522 HTR2AP28223 471 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 PRDX6P30041 224 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 OXTRP30559 389 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 CD70P32970 193 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 CD80P33681 288 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 MAGEA6P43360 314 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 OR3A2P47893 321 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 CXCL12P48061 93 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 RGS4P49798 205 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 RAB9AP51151 201 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 SGSHP51688 502 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 MRPS25P82663 173 aaKnown RBP3.28□□□□□ -1.88
UBA3-204ENST00000461522 RAD51Q06609 339 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 CKAP4Q07065 602 aaKnown RBP3.28□□□□□ -1.88
UBA3-204ENST00000461522 CD300CQ08708 224 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 SIX1Q15475 284 aaPredicted RBP3.28□□□□□ -1.88
UBA3-204ENST00000461522 CARTPTQ16568 116 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 WHAMMP3Q1A5X7 153 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 SLC5A12Q1EHB4 618 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 ANKRD55Q3KP44 614 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 GPR33Q49SQ1 333 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 CARD16Q5EG05 197 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 C6orf183Q5T699 404 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 SEL1L2Q5TEA6 688 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 GPR157Q5UAW9 335 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 PODNL1Q6PEZ8 512 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 RTL4Q6ZR62 310 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 RBM45Q8IUH3 476 aaKnown RBP3.28□□□□□ -1.88
UBA3-204ENST00000461522 FAM219AQ8IW50 185 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 CCDC36Q8IYA8 594 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 APCDD1Q8J025 514 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 SLC35F6Q8N357 371 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 ZNF786Q8N393 782 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 C17orf78Q8N4C9 275 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 NPWQ8N729 165 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 BCORP1Q8N888 145 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 PRELID2Q8N945 189 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 OR4K1Q8NGD4 311 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 OR2AP1Q8NGE2 309 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 OR13C9Q8NGT0 318 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 OR2A12Q8NGT7 310 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 OR10Z1Q8NGY1 313 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 TRMT10AQ8TBZ6 339 aaKnown RBP3.28□□□□□ -1.88
UBA3-204ENST00000461522 ACTL9Q8TC94 416 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 HTR3CQ8WXA8 447 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 PHYHIPQ92561 330 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 NSMAFQ92636 917 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 TOMM40LQ969M1 308 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 RFT1Q96AA3 541 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 SLCO4A1Q96BD0 722 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 SPSB1Q96BD6 273 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 NXNL1Q96CM4 212 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 CCDC124Q96CT7 223 aaKnown RBP3.28□□□□□ -1.88
UBA3-204ENST00000461522 ECHDC3Q96DC8 303 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 DUS3LQ96G46 650 aaKnown RBP3.28□□□□□ -1.88
UBA3-204ENST00000461522 CDKN2AIPNLQ96HQ2 116 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 C4orf36Q96KX1 117 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 PPP1R36Q96LQ0 422 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 C2orf48Q96LS8 159 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 QKIQ96PU8 341 aaKnown RBP eCLIP3.28□□□□□ -1.88
UBA3-204ENST00000461522 LYSMD1Q96S90 227 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 NDNQ99608 321 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 NPAS2Q99743 824 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 PAPOLGQ9BWT3 736 aaKnown RBP3.28□□□□□ -1.88
UBA3-204ENST00000461522 ANGPTL4Q9BY76 406 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 PARD6GQ9BYG4 376 aaPredicted RBP3.28□□□□□ -1.88
UBA3-204ENST00000461522 NMNAT2Q9BZQ4 307 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 ROGDIQ9GZN7 287 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 MAGT1Q9H0U3 335 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 SLC25A51Q9H1U9 297 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 OR51B6Q9H340 312 aa3.28□□□□□ -1.88
UBA3-204ENST00000461522 RIMS4Q9H426 269 aaPredicted RBP3.28□□□□□ -1.88
UBA3-204ENST00000461522 RANBP3Q9H6Z4 567 aaPredicted RBP3.28□□□□□ -1.88
UBA3-204ENST00000461522 HEXA-AS1Q9H8Q6 139 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms