RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 ERVK-25P63136 954 aa18.7■□□□□ 0.58
ABCD4-202ENST00000460308 CD47Q08722 323 aa18.7■□□□□ 0.58
ABCD4-202ENST00000460308 FHL1Q13642 323 aa18.7■□□□□ 0.58
ABCD4-202ENST00000460308 ZNF672Q499Z4 452 aaPredicted RBP18.7■□□□□ 0.58
ABCD4-202ENST00000460308 ZER1Q7Z7L7 766 aa18.7■□□□□ 0.58
ABCD4-202ENST00000460308 SPATA24Q86W54 205 aa18.7■□□□□ 0.58
ABCD4-202ENST00000460308 ZNF611Q8N823 705 aa18.7■□□□□ 0.58
ABCD4-202ENST00000460308 NANOS1Q8WY41 292 aaKnown RBP18.7■□□□□ 0.58
ABCD4-202ENST00000460308 MBD6Q96DN6 1003 aa18.7■□□□□ 0.58
ABCD4-202ENST00000460308 SLC38A2Q96QD8 506 aa18.7■□□□□ 0.58
ABCD4-202ENST00000460308 KATNB1Q9BVA0 655 aa18.7■□□□□ 0.58
ABCD4-202ENST00000460308 GRHPRQ9UBQ7 328 aa18.7■□□□□ 0.58
ABCD4-202ENST00000460308 SIGLEC7Q9Y286 467 aa18.7■□□□□ 0.58
ABCD4-202ENST00000460308 MYO9AB2RTY4 2548 aa18.7■□□□□ 0.58
ABCD4-202ENST00000460308 PTP4A3O75365 173 aa18.69■□□□□ 0.58
ABCD4-202ENST00000460308 FARS2O95363 451 aaKnown RBP18.69■□□□□ 0.58
ABCD4-202ENST00000460308 CD14P08571 375 aa18.69■□□□□ 0.58
ABCD4-202ENST00000460308 CBR1P16152 277 aa18.69■□□□□ 0.58
ABCD4-202ENST00000460308 HMGA2P52926 109 aa18.69■□□□□ 0.58
ABCD4-202ENST00000460308 CDH11P55287 796 aa18.69■□□□□ 0.58
ABCD4-202ENST00000460308 HIST3H3Q16695 136 aa18.69■□□□□ 0.58
ABCD4-202ENST00000460308 DEFB113Q30KQ7 82 aa18.69■□□□□ 0.58
ABCD4-202ENST00000460308 ZNF627Q7L945 461 aa18.69■□□□□ 0.58
ABCD4-202ENST00000460308 LINC00471Q8N535 108 aa18.69■□□□□ 0.58
ABCD4-202ENST00000460308 LILRB1Q8NHL6 650 aaPredicted RBP18.69■□□□□ 0.58
ABCD4-202ENST00000460308 GNPDA2Q8TDQ7 276 aa18.69■□□□□ 0.58
ABCD4-202ENST00000460308 HDAC2Q92769 488 aaKnown RBP18.69■□□□□ 0.58
ABCD4-202ENST00000460308 NEUROG1Q92886 237 aa18.69■□□□□ 0.58
ABCD4-202ENST00000460308 TSPAN32Q96QS1 320 aa18.69■□□□□ 0.58
ABCD4-202ENST00000460308 ALG12Q9BV10 488 aa18.69■□□□□ 0.58
ABCD4-202ENST00000460308 CADM1Q9BY67 442 aaKnown RBP18.69■□□□□ 0.58
ABCD4-202ENST00000460308 REEP1Q9H902 201 aa18.69■□□□□ 0.58
ABCD4-202ENST00000460308 CISD1Q9NZ45 108 aaKnown RBP18.69■□□□□ 0.58
ABCD4-202ENST00000460308 CSMD1Q96PZ7 3565 aa18.68■□□□□ 0.58
ABCD4-202ENST00000460308 DHRS12A0PJE2 317 aa18.68■□□□□ 0.58
ABCD4-202ENST00000460308 SHISA9B4DS77 424 aa18.68■□□□□ 0.58
ABCD4-202ENST00000460308 XKRYO14609 159 aa18.68■□□□□ 0.58
ABCD4-202ENST00000460308 OR8G3PP0DMU2 310 aa18.68■□□□□ 0.58
ABCD4-202ENST00000460308 HOXB6P17509 224 aaKnown RBP18.68■□□□□ 0.58
ABCD4-202ENST00000460308 ARR3P36575 388 aa18.68■□□□□ 0.58
ABCD4-202ENST00000460308 OR2T5Q6IEZ7 315 aa18.68■□□□□ 0.58
ABCD4-202ENST00000460308 ARIH2OSQ8N7S6 290 aa18.68■□□□□ 0.58
ABCD4-202ENST00000460308 FAM169BQ8N8A8 192 aa18.68■□□□□ 0.58
ABCD4-202ENST00000460308 OR2T29Q8NH02 315 aa18.68■□□□□ 0.58
ABCD4-202ENST00000460308 FNDC8Q8TC99 324 aa18.68■□□□□ 0.58
ABCD4-202ENST00000460308 CANT1Q8WVQ1 401 aa18.68■□□□□ 0.58
ABCD4-202ENST00000460308 FOXC2Q99958 501 aa18.68■□□□□ 0.58
ABCD4-202ENST00000460308 CHID1Q9BWS9 393 aa18.68■□□□□ 0.58
ABCD4-202ENST00000460308 BEX4Q9NWD9 120 aaPredicted RBP18.68■□□□□ 0.58
ABCD4-202ENST00000460308 POMPQ9Y244 141 aa18.68■□□□□ 0.58
ABCD4-202ENST00000460308 LYVE1Q9Y5Y7 322 aa18.68■□□□□ 0.58
ABCD4-202ENST00000460308 CSMD2Q7Z408 3487 aa18.68■□□□□ 0.58
ABCD4-202ENST00000460308 IGHV1-18A0A0C4DH31 117 aa18.67■□□□□ 0.58
ABCD4-202ENST00000460308 ARHGEF9O43307 516 aa18.67■□□□□ 0.58
ABCD4-202ENST00000460308 HLA-HP01893 362 aa18.67■□□□□ 0.58
ABCD4-202ENST00000460308 CRYAAP02489 173 aa18.67■□□□□ 0.58
ABCD4-202ENST00000460308 PIGFQ07326 219 aa18.67■□□□□ 0.58
ABCD4-202ENST00000460308 SPOCK1Q08629 439 aa18.67■□□□□ 0.58
ABCD4-202ENST00000460308 NPRL3Q12980 569 aa18.67■□□□□ 0.58
ABCD4-202ENST00000460308 C3orf36Q3SXR2 165 aa18.67■□□□□ 0.58
ABCD4-202ENST00000460308 THEM4Q5T1C6 240 aa18.67■□□□□ 0.58
ABCD4-202ENST00000460308 C1orf94Q6P1W5 598 aa18.67■□□□□ 0.58
ABCD4-202ENST00000460308 SMARCD3Q6STE5 483 aa18.67■□□□□ 0.58
ABCD4-202ENST00000460308 MDP1Q86V88 176 aa18.67■□□□□ 0.58
ABCD4-202ENST00000460308 ADGRG5Q8IZF4 528 aa18.67■□□□□ 0.58
ABCD4-202ENST00000460308 SLC22A24Q8N4F4 322 aa18.67■□□□□ 0.58
ABCD4-202ENST00000460308 SMAP2Q8WU79 429 aaPredicted RBP18.67■□□□□ 0.58
ABCD4-202ENST00000460308 TMEM171Q8WVE6 324 aa18.67■□□□□ 0.58
ABCD4-202ENST00000460308 KCNK17Q96T54 332 aa18.67■□□□□ 0.58
ABCD4-202ENST00000460308 GPA33Q99795 319 aa18.67■□□□□ 0.58
ABCD4-202ENST00000460308 MMADHCQ9H3L0 296 aaPredicted RBP18.67■□□□□ 0.58
ABCD4-202ENST00000460308 FAIMQ9NVQ4 179 aa18.67■□□□□ 0.58
ABCD4-202ENST00000460308 TMEM38BQ9NVV0 291 aa18.67■□□□□ 0.58
ABCD4-202ENST00000460308 CRNNQ9UBG3 495 aaPredicted RBP18.67■□□□□ 0.58
ABCD4-202ENST00000460308 SAMHD1Q9Y3Z3 626 aaKnown RBP18.67■□□□□ 0.58
ABCD4-202ENST00000460308 ATP23Q9Y6H3 246 aa18.67■□□□□ 0.58
ABCD4-202ENST00000460308 CCNB2O95067 398 aa18.66■□□□□ 0.58
ABCD4-202ENST00000460308 ZNF26P17031 533 aaPredicted RBP18.66■□□□□ 0.58
ABCD4-202ENST00000460308 FPR3P25089 353 aa18.66■□□□□ 0.58
ABCD4-202ENST00000460308 GUCA1AP43080 201 aaPredicted RBP18.66■□□□□ 0.58
ABCD4-202ENST00000460308 IDH3GP51553 393 aaPredicted RBP18.66■□□□□ 0.58
ABCD4-202ENST00000460308 GSG1Q2KHT4 349 aa18.66■□□□□ 0.58
ABCD4-202ENST00000460308 C10orf128Q5T292 105 aa18.66■□□□□ 0.58
ABCD4-202ENST00000460308 GPR139Q6DWJ6 353 aa18.66■□□□□ 0.58
ABCD4-202ENST00000460308 DPY19L2P2Q6ZN68 376 aa18.66■□□□□ 0.58
ABCD4-202ENST00000460308 ZNF519Q8TB69 540 aa18.66■□□□□ 0.58
ABCD4-202ENST00000460308 NSMAFQ92636 917 aa18.66■□□□□ 0.58
ABCD4-202ENST00000460308 Q96M85 177 aa18.66■□□□□ 0.58
ABCD4-202ENST00000460308 ZNF570Q96NI8 536 aa18.66■□□□□ 0.58
ABCD4-202ENST00000460308 KCNN2Q9H2S1 579 aa18.66■□□□□ 0.58
ABCD4-202ENST00000460308 YY1AP1Q9H869 796 aa18.66■□□□□ 0.58
ABCD4-202ENST00000460308 SMURF2Q9HAU4 748 aa18.66■□□□□ 0.58
ABCD4-202ENST00000460308 IL20RAQ9UHF4 553 aa18.66■□□□□ 0.58
ABCD4-202ENST00000460308 SLC7A8Q9UHI5 535 aa18.66■□□□□ 0.58
ABCD4-202ENST00000460308 MOKQ9UQ07 419 aa18.66■□□□□ 0.58
ABCD4-202ENST00000460308 LAMP3Q9UQV4 416 aa18.66■□□□□ 0.58
ABCD4-202ENST00000460308 ADAM18Q9Y3Q7 739 aa18.66■□□□□ 0.58
ABCD4-202ENST00000460308 U3KQV3 271 aa18.66■□□□□ 0.58
ABCD4-202ENST00000460308 RAI1Q7Z5J4 1906 aaPredicted RBP18.66■□□□□ 0.58
ABCD4-202ENST00000460308 GNGT2O14610 69 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms