RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 OR4F3Q6IEY1 312 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 RGMBQ6NW40 437 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 GALNT10Q86SR1 603 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 HGDQ93099 445 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 WDR34Q96EX3 536 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 DOK1Q99704 481 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 ARV1Q9H2C2 271 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 INIPQ9NRY2 104 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 BET1LQ9NYM9 111 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 CDC42EP3Q9UKI2 254 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 B4GAT1O43505 415 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 BRINP1O60477 761 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 EIF4E2O60573 245 aaKnown RBP4.84□□□□□ -1.64
CSMD3-204ENST00000455883 CTSLP07711 333 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 ADORA3P0DMS8 318 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 APEHP13798 732 aaKnown RBP4.84□□□□□ -1.64
CSMD3-204ENST00000455883 NID1P14543 1247 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 ALAS2P22557 587 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 CNR2P34972 360 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 GZMKP49863 264 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 AGTR2P50052 363 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 PER3P56645 1201 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 ZNF684Q5T5D7 378 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 NADSYN1Q6IA69 706 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 TMEM184AQ6ZMB5 413 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 LINC00596Q86U02 117 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 ZNF100Q8IYN0 542 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 ZNF680Q8NEM1 530 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 OR11L1Q8NGX0 322 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 PTX4Q96A99 478 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 WDR92Q96MX6 357 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 TMEM70Q9BUB7 260 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 SLC35B3Q9H1N7 401 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 NIT2Q9NQR4 276 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 SSUH2Q9Y2M2 353 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 A0A0A6YYJ9 748 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 FIGNL2A6NMB9 653 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 G3V3Q6 166 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 PPP1R11O60927 126 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-204ENST00000455883 ARAFP10398 606 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 NTF3P20783 257 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 YPEL5P62699 121 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 BTN1A1Q13410 526 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 TMEM128Q5BJH2 165 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 OR4C5Q8NGB2 326 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 FAM216AQ8WUB2 273 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 EGLN1Q9GZT9 426 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 KCPQ6ZWJ8 1503 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 ZNF207O43670 478 aaKnown RBP4.83□□□□□ -1.64
CSMD3-204ENST00000455883 MAFKO60675 156 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 KIR2DL3P43628 341 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 CLCNKAP51800 687 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 YBX1P67809 324 aaKnown RBP4.83□□□□□ -1.64
CSMD3-204ENST00000455883 EVX2Q03828 476 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 ETV3LQ6ZN32 361 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 OR14C36Q8NHC7 312 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 GRHL3Q8TE85 626 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 CDS1Q92903 461 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 APH1AQ96BI3 265 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 NPAS1Q99742 590 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 BARHL1Q9BZE3 327 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 AMBNQ9NP70 447 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 TRBV9A0A0B4J1U6 114 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 H7C1C5 153 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 MAGP20916 626 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 CASP3P42574 277 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 SLC11A1P49279 550 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 DLX2Q07687 328 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-204ENST00000455883 IL17AQ16552 155 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 PKDCCQ504Y2 493 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 ZNF705AQ6ZN79 300 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-204ENST00000455883 LRP11Q86VZ4 500 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 CDC20BQ86Y33 519 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 SLC39A11Q8N1S5 342 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 ST8SIA1Q92185 356 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 FUBP1Q96AE4 644 aaKnown RBP4.83□□□□□ -1.64
CSMD3-204ENST00000455883 ACY3Q96HD9 319 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 CAPNS2Q96L46 248 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 DEFB126Q9BYW3 111 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 FBXL2Q9UKC9 423 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 BCL2L11O43521 198 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 CA11O75493 328 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 ZNF93P35789 620 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-204ENST00000455883 SUMO3P55854 103 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-204ENST00000455883 HLXQ14774 488 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-204ENST00000455883 SAMD13Q5VXD3 122 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 OR2W3Q7Z3T1 314 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 BPIFB2Q8N4F0 458 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 ADIPOR1Q96A54 375 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 ZC3HAV1LQ96H79 300 aaKnown RBP4.83□□□□□ -1.64
CSMD3-204ENST00000455883 ZNF583Q96ND8 569 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 PRTFDC1Q9NRG1 225 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 B3GALT5Q9Y2C3 310 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 TRAV18A0A075B6X5 111 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 G3V2L1 256 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 H3BQ06 376 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-204ENST00000455883 FZD6O60353 706 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 ABLIM3O94929 683 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 SOD2P04179 222 aa4.83□□□□□ -1.64
CSMD3-204ENST00000455883 SPINT3P49223 89 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms