RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 RBM4BQ9BQ04 359 aaKnown RBP12.86□□□□□ -0.35
VPS16-205ENST00000453689 KATNB1Q9BVA0 655 aa12.86□□□□□ -0.35
VPS16-205ENST00000453689 RBM4Q9BWF3 364 aaKnown RBP12.86□□□□□ -0.35
VPS16-205ENST00000453689 LINC00470Q9BZP3 86 aa12.86□□□□□ -0.35
VPS16-205ENST00000453689 EGLN3Q9H6Z9 239 aa12.86□□□□□ -0.35
VPS16-205ENST00000453689 SMURF2Q9HAU4 748 aa12.86□□□□□ -0.35
VPS16-205ENST00000453689 RNPEPL1Q9HAU8 725 aa12.86□□□□□ -0.35
VPS16-205ENST00000453689 PAPOLBQ9NRJ5 636 aaKnown RBP12.86□□□□□ -0.35
VPS16-205ENST00000453689 IL20Q9NYY1 176 aa12.86□□□□□ -0.35
VPS16-205ENST00000453689 PLEKHA6Q9Y2H5 1048 aa12.86□□□□□ -0.35
VPS16-205ENST00000453689 OR6C65A6NJZ3 312 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 ZNF587BE7ETH6 402 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 EI24O14681 340 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 MGRN1O60291 552 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 SLC43A1O75387 559 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 KRT33AO76009 404 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 SOX14O95416 240 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 BCL10O95999 233 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 PLAUP00749 431 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 OSMP13725 252 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 IFNGR1P15260 489 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 IGFBP5P24593 272 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 BIDP55957 195 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 TGFBR3Q03167 851 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 DAG1Q14118 895 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 MELKQ14680 651 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 TRIP10Q15642 601 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 ACKR1Q16570 336 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 NCMAPQ5T1S8 102 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 KDM4DQ6B0I6 523 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 OR7E24Q6IFN5 339 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 DPY19L2P2Q6ZN68 376 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 HDDC2Q7Z4H3 204 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 TMEM123Q8N131 208 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 PARP8Q8N3A8 854 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 C1orf162Q8NEQ5 155 aaPredicted RBP12.85□□□□□ -0.35
VPS16-205ENST00000453689 ADAD1Q96M93 576 aaKnown RBP12.85□□□□□ -0.35
VPS16-205ENST00000453689 OR2M2Q96R28 347 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 TMEM204Q9BSN7 226 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 TXNIPQ9H3M7 391 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 NGBQ9NPG2 151 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 NRIP3Q9NQ35 241 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 KRT84Q9NSB2 600 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 TBC1D23Q9NUY8 699 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 MED29Q9NX70 200 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 USE1Q9NZ43 259 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 NPAP1Q9NZP6 1156 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 REV1Q9UBZ9 1251 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 IL20RAQ9UHF4 553 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 SLC25A15Q9Y619 301 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 MYO9AB2RTY4 2548 aa12.85□□□□□ -0.35
VPS16-205ENST00000453689 PRRC2AP48634 2157 aaKnown RBP12.84□□□□□ -0.35
VPS16-205ENST00000453689 A0A1W2PR80 420 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 SLC35F4A4IF30 521 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 ZNF726A6NNF4 738 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 H3BN98 237 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 PPP1R3DO95685 299 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 RAF1P04049 648 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 TP53P04637 393 aaPredicted RBP12.84□□□□□ -0.35
VPS16-205ENST00000453689 APEHP13798 732 aaKnown RBP12.84□□□□□ -0.35
VPS16-205ENST00000453689 CDH2P19022 906 aaPredicted RBP12.84□□□□□ -0.35
VPS16-205ENST00000453689 DNASE1P24855 282 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 ALDH3A2P51648 485 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 RPS6KA3P51812 740 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 RPL27P61353 136 aaKnown RBP12.84□□□□□ -0.35
VPS16-205ENST00000453689 ERVK-25P63136 954 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 ROR2Q01974 943 aaKnown RBP12.84□□□□□ -0.35
VPS16-205ENST00000453689 SLC34A1Q06495 639 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 TOP3AQ13472 1001 aaPredicted RBP12.84□□□□□ -0.35
VPS16-205ENST00000453689 RIPK1Q13546 671 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 SLC36A3Q495N2 470 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 FAM205BPQ63HN1 556 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 GPR139Q6DWJ6 353 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 ZNF704Q6ZNC4 412 aaPredicted RBP12.84□□□□□ -0.35
VPS16-205ENST00000453689 ZBTB49Q6ZSB9 765 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 SSX8Q7RTT4 187 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 FAM122BQ7Z309 247 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 WDFY1Q8IWB7 410 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 C17orf78Q8N4C9 275 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 CBR4Q8N4T8 237 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 WDR31Q8NA23 367 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 OR8D4Q8NGM9 314 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 OR6X1Q8NH79 312 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 TEX47Q8TBZ9 253 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 ASB10Q8WXI3 467 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 TXNDC15Q96J42 360 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 TSPAN32Q96QS1 320 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 EMC6Q9BV81 110 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 PLA2G12AQ9BZM1 189 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 UBTD1Q9HAC8 227 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 SLC17A5Q9NRA2 495 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 NKX1-2Q9UD57 310 aaPredicted RBP12.84□□□□□ -0.35
VPS16-205ENST00000453689 ENOPH1Q9UHY7 261 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 TMEFF2Q9UIK5 374 aaPredicted RBP12.84□□□□□ -0.35
VPS16-205ENST00000453689 ZNF346Q9UL40 294 aaKnown RBP12.84□□□□□ -0.35
VPS16-205ENST00000453689 EDARQ9UNE0 448 aa12.84□□□□□ -0.35
VPS16-205ENST00000453689 ROS1P08922 2347 aa12.83□□□□□ -0.36
VPS16-205ENST00000453689 DPRXA6NFQ7 191 aa12.83□□□□□ -0.36
VPS16-205ENST00000453689 SOCS2O14508 198 aa12.83□□□□□ -0.36
VPS16-205ENST00000453689 CASQ2O14958 399 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms