RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 ANKRD10Q9NXR5 420 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 LRFN1Q9P244 771 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 UBQLN2Q9UHD9 624 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 C2orf72A6NCS6 295 aa14.31□□□□□ -0.12
SNX17-204ENST00000453453 ELOA3DA6NLF2 546 aaPredicted RBP14.31□□□□□ -0.12
SNX17-204ENST00000453453 CTRB1P17538 263 aa14.31□□□□□ -0.12
SNX17-204ENST00000453453 ELK1P19419 428 aa14.31□□□□□ -0.12
SNX17-204ENST00000453453 HTR1FP30939 366 aa14.31□□□□□ -0.12
SNX17-204ENST00000453453 RBM34P42696 430 aaKnown RBP14.31□□□□□ -0.12
SNX17-204ENST00000453453 PITPNBP48739 271 aa14.31□□□□□ -0.12
SNX17-204ENST00000453453 CCL11P51671 97 aa14.31□□□□□ -0.12
SNX17-204ENST00000453453 ZNF41P51814 821 aaPredicted RBP14.31□□□□□ -0.12
SNX17-204ENST00000453453 GRK1Q15835 563 aa14.31□□□□□ -0.12
SNX17-204ENST00000453453 ELOA3BQ3SY89 546 aa14.31□□□□□ -0.12
SNX17-204ENST00000453453 CTRB2Q6GPI1 263 aa14.31□□□□□ -0.12
SNX17-204ENST00000453453 NKAIN4Q8IVV8 208 aa14.31□□□□□ -0.12
SNX17-204ENST00000453453 RNF113BQ8IZP6 322 aaKnown RBP14.31□□□□□ -0.12
SNX17-204ENST00000453453 ELOA3Q8NG57 546 aa14.31□□□□□ -0.12
SNX17-204ENST00000453453 GPR119Q8TDV5 335 aa14.31□□□□□ -0.12
SNX17-204ENST00000453453 PHF21AQ96BD5 680 aa14.31□□□□□ -0.12
SNX17-204ENST00000453453 THAP7Q9BT49 309 aaPredicted RBP14.31□□□□□ -0.12
SNX17-204ENST00000453453 PPIL3Q9H2H8 161 aaKnown RBP14.31□□□□□ -0.12
SNX17-204ENST00000453453 LIN7BQ9HAP6 207 aa14.31□□□□□ -0.12
SNX17-204ENST00000453453 INPP5EQ9NRR6 644 aa14.31□□□□□ -0.12
SNX17-204ENST00000453453 TAS2R10Q9NYW0 307 aa14.31□□□□□ -0.12
SNX17-204ENST00000453453 MALT1Q9UDY8 824 aa14.31□□□□□ -0.12
SNX17-204ENST00000453453 NPTNQ9Y639 398 aa14.31□□□□□ -0.12
SNX17-204ENST00000453453 MED13Q9UHV7 2174 aa14.31□□□□□ -0.12
SNX17-204ENST00000453453 SPTBN4Q9H254 2564 aa14.31□□□□□ -0.12
SNX17-204ENST00000453453 EML6Q6ZMW3 1958 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 A0A087WUU8 490 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 MEIKINA0A087WXM9 373 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 RPS10-NUDT3A0A1W2PQS6 291 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 ADAM10O14672 748 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 CDC40O60508 579 aaKnown RBP eCLIP14.3□□□□□ -0.12
SNX17-204ENST00000453453 THY1P04216 161 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 HMGN1P05114 100 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 CD96P40200 585 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 CAV3P56539 151 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 MFAP5Q13361 173 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 MFSD13AQ14CX5 517 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 OR5M10Q6IEU7 315 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 MBOAT2Q6ZWT7 520 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 GID4Q8IVV7 300 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 CDK20Q8IZL9 346 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 TMEM255BQ8WV15 326 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 TMEM239Q8WW34 195 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 ST8SIA1Q92185 356 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 C3orf49Q96BT1 292 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 AIFM2Q9BRQ8 373 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 ZNF649Q9BS31 505 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 ABCG5Q9H222 651 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 MED9Q9NWA0 146 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 MED11Q9P086 117 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 TNFRSF10DQ9UBN6 386 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 SCP2D1Q9UJQ7 156 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 MED31Q9Y3C7 131 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 C17orf51A8MQB3 221 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 LYPD3O95274 346 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 WDPCPO95876 746 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 SULT1A3P0DMM9 295 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 SULT1A4P0DMN0 295 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 BTCP35070 178 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 CTBP2P56545 445 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 RAB14P61106 215 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 PITPNAQ00169 270 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 OR1C1Q15619 314 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 ZNF322Q6U7Q0 402 aaPredicted RBP14.3□□□□□ -0.12
SNX17-204ENST00000453453 MDGA2Q7Z553 956 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 OR1J4Q8NGS1 313 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 LHFPL5Q8TAF8 219 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 TMEM41AQ96HV5 264 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 PRSS27Q9BQR3 290 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 SLCO1C1Q9NYB5 712 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 KIF25Q9UIL4 384 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 TMEM5Q9Y2B1 443 aa14.3□□□□□ -0.12
SNX17-204ENST00000453453 OR5H15A6NDH6 313 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 SMLR1H3BR10 107 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 GNB5O14775 395 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 RNF13O43567 381 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 SLC25A12O75746 678 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 RRASP10301 218 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 CXCR1P25024 350 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 FPR3P25089 353 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 PTGS2P35354 604 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 EIF2S3P41091 472 aaKnown RBP14.29□□□□□ -0.12
SNX17-204ENST00000453453 POLR2HP52434 150 aaKnown RBP14.29□□□□□ -0.12
SNX17-204ENST00000453453 TAS2R43P59537 309 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 AANATQ16613 207 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 BCL2L15Q5TBC7 163 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 LRRC69Q6ZNQ3 347 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 TMEM91Q6ZNR0 172 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 GRINAQ7Z429 371 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 COMMD7Q86VX2 200 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 SPACA3Q8IXA5 215 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 NRMQ8IXM6 262 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 OR8H3Q8N146 312 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 TEX19Q8NA77 164 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 GALNT11Q8NCW6 608 aa14.29□□□□□ -0.12
SNX17-204ENST00000453453 OR2M3Q8NG83 312 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms