RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 VIMP08670 466 aaKnown RBP12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 HLA-DOBP13765 273 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 DRD4P21917 467 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 HTR2AP28223 471 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 LIPAP38571 399 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 ATP4BP51164 291 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 AQP5P55064 265 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 HOXC5Q00444 222 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 PLP2Q04941 152 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 STX3Q13277 289 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 RGNQ15493 299 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 SKA3Q8IX90 412 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 RNF217Q8TC41 542 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 TMEM54Q969K7 222 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 TRIM44Q96DX7 344 aaPredicted RBP12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 GAL3ST1Q99999 423 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 TMEM27Q9HBJ8 222 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 SDR39U1Q9NRG7 319 aaPredicted RBP12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 CYSLTR2Q9NS75 346 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 TMEM38BQ9NVV0 291 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 GLTPQ9NZD2 209 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 OPN4Q9UHM6 478 aa12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 POLR3KQ9Y2Y1 108 aaPredicted RBP12.16□□□□□ -0.46
LYSMD3-202ENST00000453259 A0A0B4J2E0 115 aa12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 IQCMA0A1B0GVH7 501 aa12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 A0A1B0GX12 115 aa12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 WDR91A4D1P6 747 aa12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 H3BSA7 217 aa12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 TPD52L2O43399 206 aaKnown RBP12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 ADH4P08319 380 aa12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 UCP2P55851 309 aa12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 ZMAT1Q5H9K5 638 aa12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 AVPI1Q5T686 147 aa12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 USP51Q70EK9 711 aa12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 RANBP3LQ86VV4 465 aaPredicted RBP12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 LSRQ86X29 649 aaPredicted RBP12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 OR5J2Q8NH18 312 aa12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 ST7LQ8TDW4 575 aa12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 ZNF566Q969W8 418 aa12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 SLC25A28Q96A46 364 aa12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 LRRC58Q96CX6 371 aa12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 SLC25A44Q96H78 314 aaPredicted RBP12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 TXNDC15Q96J42 360 aa12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 DIRC2Q96SL1 478 aa12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 EGLN1Q9GZT9 426 aa12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 PLEK2Q9NYT0 353 aa12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 NUP50Q9UKX7 468 aa12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 TGP01266 2768 aa12.15□□□□□ -0.46
LYSMD3-202ENST00000453259 PLSCR5A0PG75 271 aa12.14□□□□□ -0.47
LYSMD3-202ENST00000453259 CENPBD1B2RD01 187 aa12.14□□□□□ -0.47
LYSMD3-202ENST00000453259 FMO6PO60774 539 aa12.14□□□□□ -0.47
LYSMD3-202ENST00000453259 OR6A2O95222 327 aa12.14□□□□□ -0.47
LYSMD3-202ENST00000453259 CLPTM1O96005 669 aa12.14□□□□□ -0.47
LYSMD3-202ENST00000453259 LCKP06239 509 aa12.14□□□□□ -0.47
LYSMD3-202ENST00000453259 RNASE1P07998 156 aaKnown RBP12.14□□□□□ -0.47
LYSMD3-202ENST00000453259 FAM157BP0CG42 384 aa12.14□□□□□ -0.47
LYSMD3-202ENST00000453259 PPIBP23284 216 aaKnown RBP12.14□□□□□ -0.47
LYSMD3-202ENST00000453259 AHCYP23526 432 aa12.14□□□□□ -0.47
LYSMD3-202ENST00000453259 BIDP55957 195 aa12.14□□□□□ -0.47
LYSMD3-202ENST00000453259 DEFA6Q01524 100 aa12.14□□□□□ -0.47
LYSMD3-202ENST00000453259 ARMCX4Q5H9R4 360 aa12.14□□□□□ -0.47
LYSMD3-202ENST00000453259 C6orf10Q5SRN2 563 aa12.14□□□□□ -0.47
LYSMD3-202ENST00000453259 REEP3Q6NUK4 255 aa12.14□□□□□ -0.47
LYSMD3-202ENST00000453259 HDDC2Q7Z4H3 204 aa12.14□□□□□ -0.47
LYSMD3-202ENST00000453259 VPS33AQ96AX1 596 aa12.14□□□□□ -0.47
LYSMD3-202ENST00000453259 MOGAT1Q96PD6 335 aa12.14□□□□□ -0.47
LYSMD3-202ENST00000453259 SLC13A4Q9UKG4 626 aa12.14□□□□□ -0.47
LYSMD3-202ENST00000453259 PPIAL4AQ9Y536 164 aa12.14□□□□□ -0.47
LYSMD3-202ENST00000453259 GMEB1Q9Y692 573 aa12.14□□□□□ -0.47
LYSMD3-202ENST00000453259 CLIC1O00299 241 aa12.13□□□□□ -0.47
LYSMD3-202ENST00000453259 DHHO43323 396 aa12.13□□□□□ -0.47
LYSMD3-202ENST00000453259 SERPINB7O75635 380 aa12.13□□□□□ -0.47
LYSMD3-202ENST00000453259 ADORA3P0DMS8 318 aa12.13□□□□□ -0.47
LYSMD3-202ENST00000453259 CBLP22681 906 aa12.13□□□□□ -0.47
LYSMD3-202ENST00000453259 CPT2P23786 658 aa12.13□□□□□ -0.47
LYSMD3-202ENST00000453259 EPHA3P29320 983 aa12.13□□□□□ -0.47
LYSMD3-202ENST00000453259 ZNF81P51508 661 aa12.13□□□□□ -0.47
LYSMD3-202ENST00000453259 RGS8P57771 180 aaPredicted RBP12.13□□□□□ -0.47
LYSMD3-202ENST00000453259 BST1Q10588 318 aa12.13□□□□□ -0.47
LYSMD3-202ENST00000453259 ALKBH6Q3KRA9 238 aa12.13□□□□□ -0.47
LYSMD3-202ENST00000453259 ZNF613Q6PF04 617 aa12.13□□□□□ -0.47
LYSMD3-202ENST00000453259 SLC35D2Q76EJ3 337 aa12.13□□□□□ -0.47
LYSMD3-202ENST00000453259 SLC16A14Q7RTX9 510 aa12.13□□□□□ -0.47
LYSMD3-202ENST00000453259 MIER2Q8N344 545 aa12.13□□□□□ -0.47
LYSMD3-202ENST00000453259 C10orf53Q8N6V4 93 aa12.13□□□□□ -0.47
LYSMD3-202ENST00000453259 GOLGA6L1Q8N7Z2 621 aa12.13□□□□□ -0.47
LYSMD3-202ENST00000453259 MAELQ96JY0 434 aaKnown RBP12.13□□□□□ -0.47
LYSMD3-202ENST00000453259 ZNF607Q96SK3 696 aa12.13□□□□□ -0.47
LYSMD3-202ENST00000453259 RNF121Q9H920 327 aa12.13□□□□□ -0.47
LYSMD3-202ENST00000453259 UNKLQ9H9P5 680 aaKnown RBP12.13□□□□□ -0.47
LYSMD3-202ENST00000453259 PNPOQ9NVS9 261 aa12.13□□□□□ -0.47
LYSMD3-202ENST00000453259 ZDHHC8Q9ULC8 765 aa12.13□□□□□ -0.47
LYSMD3-202ENST00000453259 WNK2Q9Y3S1 2297 aa12.13□□□□□ -0.47
LYSMD3-202ENST00000453259 A0A1B0GUS0 222 aa12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 DNAJC9-AS1A6NH13 148 aa12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 RGS16O15492 202 aaPredicted RBP12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 UBOX5O94941 541 aa12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 PPIAL4GP0DN37 164 aa12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 ARAFP10398 606 aa12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 BGNP21810 368 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms