RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 MEPEQ9NQ76 525 aaPredicted RBP15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 TAS2R16Q9NYV7 291 aa15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 LRCH1Q9Y2L9 728 aa15.83■□□□□ 0.12
SQSTM1-204ENST00000453046 ABCD4O14678 606 aa15.82■□□□□ 0.12
SQSTM1-204ENST00000453046 SLC16A6O15403 523 aa15.82■□□□□ 0.12
SQSTM1-204ENST00000453046 LY6G6DO95868 133 aa15.82■□□□□ 0.12
SQSTM1-204ENST00000453046 SOD3P08294 240 aa15.82■□□□□ 0.12
SQSTM1-204ENST00000453046 OR7A5Q15622 319 aa15.82■□□□□ 0.12
SQSTM1-204ENST00000453046 ZIK1Q3SY52 487 aaPredicted RBP15.82■□□□□ 0.12
SQSTM1-204ENST00000453046 SLC36A3Q495N2 470 aa15.82■□□□□ 0.12
SQSTM1-204ENST00000453046 C6orf52Q5T4I8 152 aa15.82■□□□□ 0.12
SQSTM1-204ENST00000453046 OR7E24Q6IFN5 339 aa15.82■□□□□ 0.12
SQSTM1-204ENST00000453046 PAQR6Q6TCH4 344 aa15.82■□□□□ 0.12
SQSTM1-204ENST00000453046 SEZ6L2Q6UXD5 910 aa15.82■□□□□ 0.12
SQSTM1-204ENST00000453046 RASSF6Q6ZTQ3 369 aa15.82■□□□□ 0.12
SQSTM1-204ENST00000453046 LSRQ86X29 649 aaPredicted RBP15.82■□□□□ 0.12
SQSTM1-204ENST00000453046 CYGBQ8WWM9 190 aa15.82■□□□□ 0.12
SQSTM1-204ENST00000453046 SGTBQ96EQ0 304 aa15.82■□□□□ 0.12
SQSTM1-204ENST00000453046 PITX2Q99697 317 aa15.82■□□□□ 0.12
SQSTM1-204ENST00000453046 ANKRD60Q9BZ19 345 aa15.82■□□□□ 0.12
SQSTM1-204ENST00000453046 GRIP2Q9C0E4 1043 aa15.82■□□□□ 0.12
SQSTM1-204ENST00000453046 C20orf141Q9NUB4 165 aa15.82■□□□□ 0.12
SQSTM1-204ENST00000453046 CISD1Q9NZ45 108 aaKnown RBP15.82■□□□□ 0.12
SQSTM1-204ENST00000453046 MALT1Q9UDY8 824 aa15.82■□□□□ 0.12
SQSTM1-204ENST00000453046 FLVCR1Q9Y5Y0 555 aa15.82■□□□□ 0.12
SQSTM1-204ENST00000453046 A8MVM7 634 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 EFCAB9A8MZ26 197 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 E9PQ18 207 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 DENRO43583 198 aaKnown RBP15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 NPIPB7O75200 414 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 AKR7A3O95154 331 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 DANCRP0C864 163 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 PTNP21246 168 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 NTF4P34130 210 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 SLC9A3P48764 834 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 RPS6KA3P51812 740 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 CDH11P55287 796 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 ADARB1P78563 741 aaKnown RBP15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 NPRL3Q12980 569 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 IL18R1Q13478 541 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 SLC17A1Q14916 467 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 C9orf135Q5VTT2 229 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 RPL13AP3Q6NVV1 102 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 TMEM108Q6UXF1 575 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 ZNF620Q6ZNG0 422 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 GPAT4Q86UL3 456 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 PIAS4Q8N2W9 510 aaPredicted RBP15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 OR6S1Q8NH40 331 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 GPA33Q99795 319 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 FAIMQ9NVQ4 179 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 FAM118AQ9NWS6 357 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 NPAP1Q9NZP6 1156 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 REV1Q9UBZ9 1251 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 POU2F3Q9UKI9 436 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 CDH10Q9Y6N8 788 aa15.81■□□□□ 0.12
SQSTM1-204ENST00000453046 TRAV36DV7A0A075B6V5 113 aa15.8■□□□□ 0.12
SQSTM1-204ENST00000453046 A0A1W2PR80 420 aa15.8■□□□□ 0.12
SQSTM1-204ENST00000453046 LIPT2A6NK58 231 aa15.8■□□□□ 0.12
SQSTM1-204ENST00000453046 OR7A10O76100 309 aa15.8■□□□□ 0.12
SQSTM1-204ENST00000453046 SAGP10523 405 aaPredicted RBP15.8■□□□□ 0.12
SQSTM1-204ENST00000453046 CDKN1AP38936 164 aa15.8■□□□□ 0.12
SQSTM1-204ENST00000453046 ZNF83P51522 516 aa15.8■□□□□ 0.12
SQSTM1-204ENST00000453046 TGFBR3Q03167 851 aa15.8■□□□□ 0.12
SQSTM1-204ENST00000453046 EGR4Q05215 589 aa15.8■□□□□ 0.12
SQSTM1-204ENST00000453046 ZNF74Q16587 644 aa15.8■□□□□ 0.12
SQSTM1-204ENST00000453046 TMEM225Q6GV28 225 aa15.8■□□□□ 0.12
SQSTM1-204ENST00000453046 USP51Q70EK9 711 aa15.8■□□□□ 0.12
SQSTM1-204ENST00000453046 TMEM99Q8N816 258 aa15.8■□□□□ 0.12
SQSTM1-204ENST00000453046 FANK1Q8TC84 345 aa15.8■□□□□ 0.12
SQSTM1-204ENST00000453046 LIPHQ8WWY8 451 aa15.8■□□□□ 0.12
SQSTM1-204ENST00000453046 RADILQ96JH8 1075 aa15.8■□□□□ 0.12
SQSTM1-204ENST00000453046 CADP27708 2225 aa15.8■□□□□ 0.12
SQSTM1-204ENST00000453046 LOC100130705A0A1B0GUX0 176 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 UNC119BA6NIH7 251 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 OVOL3O00110 214 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 CDC42EP2O14613 210 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 SOX14O95416 240 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 AHSA1O95433 338 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 TP53P04637 393 aaPredicted RBP15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 MAKP20794 623 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 PTAFRP25105 342 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 CRISP1P54107 249 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 FOXG1P55316 489 aaPredicted RBP15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 GABRA6Q16445 453 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 CLEC12BQ2HXU8 276 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 PGGHGQ32M88 737 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 ANKDD1AQ495B1 522 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 TSPO2Q5TGU0 170 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 C1orf140Q5VVS0 124 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 SLC22A25Q6T423 547 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 AAED1Q7RTV5 226 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 SLC46A3Q7Z3Q1 461 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 DEPDC4Q8N2C3 294 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 TEX47Q8TBZ9 253 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 HRASLS5Q96KN8 279 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 MUS81Q96NY9 551 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 SF3B5Q9BWJ5 86 aaKnown RBP15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 FKRPQ9H9S5 495 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 SLC7A10Q9NS82 523 aa15.79■□□□□ 0.12
SQSTM1-204ENST00000453046 NDRG4Q9ULP0 352 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms